KEGG   Eucalyptus grandis (rose gum): 104439872
Entry
104439872         CDS       T03547                                 
Name
(RefSeq) probable polygalacturonase At3g15720
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr00040  Pentose and glucuronate interconversions
egr01100  Metabolic pathways
Module
egr_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:egr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    104439872
Enzymes [BR:egr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     104439872
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 NosD
Other DBs
NCBI-GeneID: 104439872
NCBI-ProteinID: XP_010051184
Position
3:52048398..52058453
AA seq 495 aa
MESGLIKVISQDVVKQDRTSKRGEVAGEAIHNVECADQDVGLSRQGNMDHFFAASSALII
AALLEISILYYLMASIFLALNGNTAMFLRNASLGYFGFVAAIYLVLFAASSTFSSHGIVA
ASPTYNVVNYGATGSGDDDDAQAFVKAWEDTCGDSGEKGTPTLAVPGGKKFRLSPVAFKG
PCKSSSINVQIDGTLVAPSSLSGWKGCSSGRWLNFQDVANLNVKGSGQVDGQGSLWWDGA
KGGCEKRPTALGFLNCINLVLSGLHHVNSPRNHISIINCHNGIISNLHITAPESSPNTDG
IDISRSNNLDIHDLDIQTGDDCIAINGGSSNISITRVSCGPGHGISIGSLGKNGAYKTVE
QVQVRDCTFRGTTNGVRIKTWQGGSGYAKNIIFNQIKLDAVSNPIIIDQFYNPGGAQLNE
ASSVVVSDVSFTSIRGTSASDQAITLSCSSVGCSDITFDNVDITSSKPGDTVTASCENCH
GSATLTTPPVPCLNH
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggagtcggggttgatcaaagtcataagtcaagatgtggtgaaacaagatcgcacgagc
aagagaggtgaagttgccggcgaagccattcacaatgtagagtgcgctgaccaggatgtg
ggacttagtcgccaggggaatatggatcattttttcgctgcctcctccgctctcattatt
gcagcgctattagagatctcaatattatattatttgatggcatcgatattcttagcactg
aatgggaacactgcaatgtttcttcggaatgcgtctcttggttattttggatttgtggct
gcaatatacttggtcctcttcgctgcttcgtcaactttttcaagccacggaattgttgca
gcatcacccacatacaatgtggtaaactatggcgcgactggaagtggagacgacgatgat
gcccaagcctttgtgaaagcttgggaagacacatgtggagacagcggagaaaaaggcaca
ccaactttagctgttcccggtgggaagaagtttagactatctcctgtcgctttcaaaggc
ccatgcaagtcttcaagcattaacgttcagattgatgggactttagttgctcctagttca
ctaagtggttggaaaggctgctcttcgggtagatggttgaatttccaagacgtggccaat
ctcaatgtcaaaggatcaggacaagtcgatggccagggatcgctttggtgggatggagca
aagggaggctgcgagaagcgaccaactgccttgggctttttaaattgcatcaatctggtc
ctaagtggactgcaccacgttaacagtccaagaaaccacatctccatcattaattgtcat
aatggtatcatctccaatctccatataaccgcacccgaaagtagccctaacacagatgga
atcgacatttctcgctctaataaccttgacattcacgaccttgacattcaaacaggggat
gattgcatcgctataaatggtggctccagcaacattagtatcaccagagtttcatgcgga
cctggccatggtataagtatcggaagcttaggaaagaatggagcttacaagacagtagag
caggtacaagtgcgggattgcaccttcaggggaactaccaatggagtgaggatcaagact
tggcagggaggttcgggatatgccaagaatattattttcaatcaaatcaagctcgacgca
gtgagtaacccaatcatcatcgaccaattttataatcccggaggagctcaactgaatgag
gcatccagcgtggtggtgagcgacgtgagtttcaccagcattcgagggaccagtgcttca
gaccaagccatcacactcagctgttcgagcgtaggttgctcggatatcacatttgacaac
gtcgacataacatcatcgaagcctggagatacggtcactgcctcgtgtgagaattgccat
ggatcagctactttgaccacacctcctgttccttgtttaaatcattag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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