KEGG   Eucalyptus grandis (rose gum): 104444296
Entry
104444296         CDS       T03547                                 
Name
(RefSeq) histone deacetylase complex subunit SAP18
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03013  Nucleocytoplasmic transport
egr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104444296
   03015 mRNA surveillance pathway
    104444296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104444296
   03036 Chromosome and associated proteins [BR:egr03036]
    104444296
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104444296
Chromosome and associated proteins [BR:egr03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     104444296
SSDB
Motif
Pfam: SAP18 Rad60-SLD
Other DBs
NCBI-GeneID: 104444296
NCBI-ProteinID: XP_010056255
Position
5:14008663..14012271
AA seq 165 aa
MAEPPPKRQGGGGGGGGGGGGGRPMPPPGRGGPPMMQPPRPRFEPVEREKTCPLLLRVFT
KLGGHHSKEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRDAKLSFAFVYP
DKNGRFVVREVGKTFSYGNGRRLDDAKTLAELSFQIGDYLDVAIL
NT seq 498 nt   +upstreamnt  +downstreamnt
atggcagagccgccgccgaagagacaaggaggcggcggaggaggaggaggaggaggagga
ggaggacgccctatgcctccgccggggaggggcggccccccgatgatgcagccccctcgc
cctcgcttcgagcccgtcgagcgagaaaagacatgtccgttgttgcttcgagtttttacc
aagcttgggggccatcattccaaggaagactttgcagtgagaggcaaagagcccaaagat
gaggtccagatttatacatggaaagatgctactttgcgcgagttgacagacctggtaaaa
gaggtagctccagaagccaggagaagggatgcaaaattatcatttgcttttgtttatcca
gataaaaatggtcgttttgtggttagagaggtgggaaagaccttttcttatggcaatggg
agacgactagacgatgcgaagacattggctgaactgagctttcagattggagactatctg
gatgtggcaattctgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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