KEGG   Elaeis guineensis (African oil palm): 105040308
Entry
105040308         CDS       T03921                                 
Name
(RefSeq) polyadenylate-binding protein 3
  KO
K13126  polyadenylate-binding protein
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03015  mRNA surveillance pathway
egu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105040308
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105040308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105040308
   03041 Spliceosome [BR:egu03041]
    105040308
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     105040308
   mRNA cycle factors
    Stress granule specific factors
     105040308
Spliceosome [BR:egu03041]
 Complex C
  Other components
   Complex C specific factors
    105040308
SSDB
Motif
Pfam: RRM_1 PABP RRM_5 RRM_occluded RRM_7 Chordopox_A30L
Other DBs
NCBI-GeneID: 105040308
NCBI-ProteinID: XP_010915083
UniProt: A0A6I9QVQ3
Position
3:3085515..3097339
AA seq 650 aa
MANLAPAPLGGTVQASPPQMSPTPAPGGAFINASLYVGDLDLAVTEGQLFDFFSQIGPVA
SVRVCRDQIRRVSLGYAYVNFHTAQDANHALEVLNFTPINGKPIRIMFSHRDPSIRRSGH
GNVFIKNLDHSIDNKALHDIFISFGTVLSCKVATDFNGQSKGYGFVQFEHEDAAQKAINQ
LNGMLMNGKQVYVGFFIRRQERESANGTPKFFNVYVKNLPEKFTDDDLKNEFGAFGEITS
AVVMKDENGNSRGFGFVNFKDSSAAASAVERCNGKALNDKVLYVGKAQKKTEREAELKAK
YVQERSGRMEKLQGCNLYLKNLDDTINDDRLKELFRPFGTIISCKVMVDSQGQSKGSGFV
QFSSPDEANIAINEMNGKMIGKKPLYVAVAQRKEERRARLQAHFAQLSAQGTMTPAIPSM
PSYHPAPPRLAPQQLYFGQGAPGLIPPQPAGYGFQQQLIPGIRPGVAPNFMMPYNLQRQG
QPGQRVGARRGVSQQMQQQQLIQRNANQGFRYMQSARNGVDPTIIPQGLMGPMMPLPLDA
SGMHVAPMDGVRSSPIPITALASALASATPEHQRVMLGEQLYPLVERIERDQAGKVTGML
LEMDQTEVLHLIESPDALQKKVAEALEVLRLAHATGSDAADQLGSLSLND
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcgaacctggctcccgctcccctgggcggcaccgtccaggcttctccgccacagatg
tcgccgacgccggcgccgggaggggcgttcatcaacgcttcgctctacgtcggcgatctc
gatctggccgtcacggaggggcagcttttcgatttttttagccagatcgggcccgtcgca
tccgttagggtttgcagggaccaaatccgcagggtctcgctcggatatgcttacgtcaat
ttccataccgctcaagatgctaatcatgccttagaggttttgaattttacgccaataaat
gggaagcctatcaggattatgttttcacaccgagatcctagtattcgaaggagtggtcat
ggtaatgtatttatcaagaatcttgaccactcgatcgataacaaggcattgcatgatata
tttatctcctttggtaccgtcctttcctgtaaggtggccactgattttaatggtcagtcg
aaaggatatggcttcgtacagtttgaacatgaagatgcagctcagaaagctattaatcaa
cttaatgggatgttgatgaatggaaaacaagtttatgttggtttctttatccgtcgtcaa
gaaagagaatctgcaaatggaactccaaagttctttaatgtatatgtaaagaatttgcct
gaaaagtttactgatgacgatttgaaaaatgaatttggagcatttggtgagattaccagt
gcagtagttatgaaggatgaaaatggaaattctaggggatttggctttgtaaattttaaa
gactcaagtgctgctgcttctgcagtcgagagatgtaatggaaaagctttaaatgataaa
gttttgtatgttggaaaagcacagaaaaaaactgaaagagaggctgagttgaaggccaaa
tatgtacaggagagaagtggaagaatggaaaaacttcaaggatgtaacttgtatttaaag
aatctggatgacactattaatgatgatcgtcttaaagagctgttccgtccatttggcact
ataatttcgtgcaaggtcatggtggattcacaagggcagagcaaaggttctggttttgtg
caattttcttctccagacgaagctaacattgctataaatgaaatgaatggcaagatgata
ggaaagaagcctttatatgttgctgtggctcaacgtaaagaggagagaagagcaaggttg
caggctcattttgcacaacttagtgctcaggggactatgacacctgcaatcccctctatg
cccagctaccaccctgctccacctagacttgccccacagcaactttactttggtcagggt
gctcctggtctcattccgccccaaccagcaggctatggtttccaacagcagcttattcct
ggaatccggcctggtgttgcccctaacttcatgatgccttataaccttcagaggcaggga
caacctggacagagggtgggtgctaggcgaggagtgtcccagcaaatgcagcagcagcag
ttgattcagcgtaatgctaatcagggctttcgatatatgcaaagtgctcgtaatggggtt
gatccaacaatcatacctcagggtttgatgggtccaatgatgcctttaccacttgatgca
agtggtatgcatgtcgctccaatggatggagtccgatcttcaccaattccaatcacagct
cttgcctctgctctagcttctgcaactcctgagcatcaacgagtgatgctgggcgagcag
ttatacccacttgttgaacgtattgaacgggatcaggctggcaaagtgactggaatgctc
ttagagatggatcaaactgaggtgcttcaccttatagaatctccggatgcactccagaag
aaagttgcagaagctttggaagtcctacgcttagcacatgctacaggttcagatgctgca
gatcagcttggttcattgtccctgaatgactaa

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