KEGG   Elaeis guineensis (African oil palm): 105043153
Entry
105043153         CDS       T03921                                 
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
  KO
K10779  transcriptional regulator ATRX
Organism
egu  Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:egu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:egu03000]
    105043153
   03036 Chromosome and associated proteins [BR:egu03036]
    105043153
Transcription factors [BR:egu03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    105043153
Chromosome and associated proteins [BR:egu03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105043153
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C DEAD ADD_ATRX
Other DBs
NCBI-GeneID: 105043153
NCBI-ProteinID: XP_010918888
UniProt: A0A6I9R1P0
Position
4:33295629..33340230
AA seq 1553 aa
MEGPETEQLQLKKMEVIILEEQQEQEGMAKECKEEELFEEGHKRGRDVHIKKHEEKKNDE
CIKEHEEKKKDIEMEKPWNSDEDVRSDSYEMFVDDLDSEQASTSDNDDESNSEVPLTDAE
VEELIAEFLEVESKAAEAQESLEKESLARVESEVRAELAENLHGDALEMAISTEMKTFRE
EWEAVLDDLETRSALLSEQLDGAGIELSSLYKYIESQVPNGCCTEAWKKRAHWVGSQVTN
EVNQSIREAEEYLQSCRPVRRRHGRLLEEGASGFLERTLSIKDKDNLAVNSEKDWSKFDE
LIQSHGCSGSTSFGSKNWASVYLASTPQQAAELGLKLPGVDEVEEIGEIEGNINDPLYAA
AIANEKEIELSEEQRRKYRKVREEDDVQITMKLQRHLKRRRNKNIQESIEKDVPDGSSLS
NECPQPVSEKPSLSENSVANVDGTDIFIQNLESQAVISNGSKNEKLMFNGTWKRSHENED
AAIDNKRSRTVIIDSDDEVQELDSKSVSHAPSREQDSPSHVRKEVDIIDVDVLPSPCPKD
ISRNFRCTACSDVLKASEVHRHPLLDVIICGNCKFLVVEKRRLEDPVLGGYCRWCGKGDD
VINCNSCKILFCAACIARNFGEECLSEAKTSGWQCCCCSPTLLHGFILDCEKAIGGLVVF
SSDSDSDSELSGGQMDVTISNRKRQKRKIRRILDDAELGEETKQKIAMEKARQEHLKSMQ
AQSAGKLCHKSPAYVNGDATEVAMGVADDGYIVNVAREEDEEPVRIPRSISAKLKPHQVA
GIRFMWENVIQSVKKVRSGDRGFGCILAHTMGLGKTFQVIAFLYAAMRTSDLELKTALIV
TPVNVLHNWRQEFVKWKPEEGKPLRVYMLEDVTREKRAYLLSKWRIKGGVLLIGYAAFRN
LSLGKHVKDRHAASEICNALHYGPDILVCDEAHMIKNTRADITQALKQVKTQRRIALTGS
PLQNNLMEYYCMVDFVREGYLGSSHEFRNRFQNPIENGQHTNSTLNDVKIMNQRSHILYE
QLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKKFLDVHGFTSDKVSSEKTIRR
SCFFAGYQALAQIWNHPGLLQMAKEHRDSLRREDAVENFLVDDSSSDDNMETDLTNGEKQ
RMKNGSLHKKSDTIFCHEENDWWEDLLNEKIYREVDYSGKMVLLLDILSMSSEAGDKALV
FSQSLTTLDLIELFLSKLPRKGREGKYWKQGKDWYRLDGSTQCAERQKLVERFNEPTNRR
VKCTLISTRAGSLGINLHAANRVIVVDGSWNPTYDLQAIYRVWRYGQNKPVYAYRLMAHG
TMEEKIYKRQVTKEGLAARVVDRQQIHRTMSKEEILHLFDFGEDENSDMLEQKQENQVLP
NQYKTGEIGYSWGQKSLPLSHGACCTDKIMESIFSRHYPRWIANYHEHETLLQENEAERL
SKEEQDIAWQTYQRSLEWEEVHRTVFEDSERKLVADDHVKKKLVADDALPESSVPRQTKG
SSRSRPINQRKCTNLAHLLTLRSQGTKSGCSTICGECAQEISWENLNRDGRSR
NT seq 4662 nt   +upstreamnt  +downstreamnt
atggagggtcctgaaacagaacaactgcagctgaagaaaatggaagttataatattagaa
gaacaacaagagcaggagggtatggccaaggaatgtaaagaggaggaactttttgaggag
ggccataaaaggggaagagacgttcatatcaagaagcatgaagaaaaaaagaacgatgag
tgtataaaggagcatgaagaaaaaaagaaggatatagaaatggaaaaaccatggaacagt
gatgaagatgtacgaagcgactcttatgagatgtttgttgatgatttggatagtgagcag
gcatcaacatctgacaatgatgatgaatcaaattccgaggtgcctttaactgatgcagaa
gttgaagaacttatcgcggagtttcttgaagttgagagtaaggcagcagaggcacaagag
tcacttgagaaagagtcacttgcccgagtggaaagtgaagtaagagcggagctagctgag
aatcttcatggggatgcactggaaatggctatttcaactgaaatgaaaacattcagagaa
gaatgggaggctgttcttgatgatttagagactcgaagtgctctcttgtcggaacaactt
gatggggcaggcattgagctttccagtctttacaaatatattgaaagtcaagttcctaat
gggtgttgtacagaagcttggaagaaaagggctcactgggtaggctctcaggtcacaaat
gaagttaatcaatcaattagagaagctgaagaataccttcaatcctgtcgacctgtaagg
agacgacatggtcggctgttggaagaaggtgctagtggctttctagaaagaacactatcc
atcaaagataaggacaatcttgcagtaaattctgagaaagattggagtaagtttgatgag
cttattcaatctcatggctgctcgggaagtacttcgtttggtagcaagaattgggcatct
gtttaccttgccagtactccccagcaagctgcagaattgggcctcaagttgcctggagtt
gatgaggtagaggagattggcgaaattgagggcaatattaatgatcctctctatgctgct
gcgattgcgaatgaaaaggaaattgagctctctgaagaacaaaggagaaagtatagaaag
gtaagagaagaagatgatgtacaaataacgatgaaactgcaacgtcatttgaagagaagg
agaaacaagaatattcaggaatctattgagaaagatgtcccagatggttcttccttgtca
aacgagtgtcctcagccagtttctgagaagccaagcttatccgaaaatagtgttgccaat
gttgatggtaccgatatttttattcaaaatttggaatctcaagctgttatttctaatgga
agtaaaaatgaaaagttgatgtttaatggcacttggaagcgttcacatgaaaatgaagat
gctgccattgacaataaaaggagtcgaactgttataatagacagtgatgatgaagtgcag
gagttggacagcaaatctgtttctcatgcaccaagtagggagcaagattcaccttcgcat
gttaggaaagaggttgacattatagatgttgatgtcctaccttctccctgtccaaaagac
atttccagaaattttcgctgtactgcatgttctgatgtattgaaagcttctgaagtgcac
aggcatccactcttggatgtcataatctgtggtaactgcaaatttctggtggtggagaaa
aggcgacttgaggatcctgtgttaggtggttactgcagatggtgtggaaaaggtgatgat
gttataaattgcaactcatgtaagattctattctgtgctgcatgtatagccaggaatttt
ggtgaagagtgcttatcagaagctaaaacctctggttggcagtgctgttgctgctcacca
actctgttgcatggatttattttagattgtgaaaaagccattggaggtcttgtggttttt
agctctgatagtgatagtgattcagagttatccggtggtcaaatggacgttacaatcagc
aataggaagagacaaaaaaggaagattcggagaatcctagatgatgcggaacttggagaa
gaaaccaagcaaaaaattgcaatggagaaggctaggcaagaacatctgaaatcaatgcaa
gctcaatcagctggcaaattatgtcataagagtccagcatatgttaatggagatgcaaca
gaagttgccatgggtgttgcagatgatggctatatagtgaatgtagccagggaggaagat
gaggaaccagtgaggattccaaggagtatttctgcaaagttgaaaccccaccaggttgca
ggaatacgattcatgtgggagaatgttatacagtctgtcaaaaaggtcagatctggggat
agaggttttgggtgcatattagcccataccatgggtcttgggaaaacttttcaggtcatt
gcttttctatacgctgctatgagaacttctgatttagaattaaaaactgcacttatagtt
acaccagttaatgtacttcataactggcggcaagaatttgtgaaatggaaacctgaggaa
ggaaagcctcttcgtgtgtacatgttggaagatgttaccagggagaaaagagcatatttg
ctttcaaaatggagaatcaaaggtggagttcttctaataggctatgctgctttccgaaac
ttgtcacttggaaagcatgtgaaggatcggcatgcggccagtgaaatttgcaatgccttg
cattatggacctgatatacttgtatgtgatgaggcccatatgatcaagaatacaagagct
gatatcacccaggctttgaaacaagtgaagacacaaaggagaatagcattaactgggtca
cccctgcagaacaatttgatggagtattattgtatggttgattttgtaagggaaggatat
ctgggaagtagtcatgaatttcgaaaccggttccaaaaccccatagaaaatgggcagcac
acaaattccactttgaatgatgtaaagattatgaaccaaaggtcacatattttatatgaa
cagcttaaaggatttgtccagaggatggacatgaatgtggttaagaaggacctccctccc
aaaactgtttttgtcatcactgtaaagctttctccattgcagaggaagttgtacaaaaaa
tttttagatgtgcatggatttacaagtgacaaagtttcttctgaaaaaacaattaggcgg
agttgcttctttgctggttatcaggcactggctcagatatggaaccatcctggtctcttg
caaatggccaaagaacatagagattccttaagacgagaagatgctgttgagaactttctt
gtggatgacagctctagtgatgataacatggaaactgacttaacaaatggagagaagcag
aggatgaaaaatggttccttgcataagaaaagtgatacaattttttgtcatgaggaaaat
gactggtgggaggatcttctaaatgaaaagatatacagggaagttgattacagtggtaaa
atggttttactacttgatatcctctccatgagttctgaggctggtgataaggcattagtg
tttagccaaagcttgacaactctagatttgatagagttgtttctatcaaaattgccaagg
aaaggaagagaaggcaagtattggaagcaaggcaaggattggtataggctagatggaagc
acacagtgtgccgaaaggcagaagcttgtggagagatttaatgagcccacaaatagaagg
gtgaaatgtacacttatatcaacacgggctggatccctgggcatcaaccttcatgctgct
aaccgtgttattgttgttgatggttcatggaatccaacctatgaccttcaggctatttat
cgtgtttggagatatgggcaaaacaaacctgtctatgcttaccgtttgatggcacatgga
accatggaagaaaagatatataaacggcaggtgacaaaggaaggactcgctgcaagggtg
gtggatagacaacaaatacatagaacgatgtccaaggaagaaatattgcacctttttgac
tttggtgaagatgaaaattctgacatgcttgaacagaaacaagaaaatcaagtcttaccc
aatcagtataaaactggtgaaattggatactcatggggacagaaatccttgcctctttct
catggagcttgctgtactgacaagatcatggaaagcatctttagcagacattatccccgc
tggattgcaaactaccatgaacatgagacccttttacaagagaatgaagcagagagacta
tcaaaagaggagcaagacatagcctggcagacttatcaaagatcattggagtgggaagag
gtccacaggacagtttttgaggattctgagagaaaattggttgcagatgaccatgtcaag
aaaaaactagttgcagatgatgctcttccagagagtagcgttcctcggcaaaccaagggc
agctcaagaagccgccccattaaccaaaggaagtgtaccaacctggctcatttgctaaca
ttgagaagccaaggcactaaatctggctgcagcaccatttgtggagaatgtgcacaggag
ataagctgggagaacctcaacagagatgggaggtctaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system