KEGG   Elaeis guineensis (African oil palm): 105046712
Entry
105046712         CDS       T03921                                 
Name
(RefSeq) cell differentiation protein RCD1 homolog isoform X1
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105046712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105046712
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     105046712
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 105046712
NCBI-ProteinID: XP_010923682
UniProt: A0A6I9RBP7
Position
6:7126155..7143566
AA seq 349 aa
MANLPPTLSISPSFGGSTPSSPAAAVSGGAATQATKDRKMASAEQLVLDLCDPELRENAL
LDLSKKREIFQDLAPLLWNSYGTIAALLQEIVSIYPALSPPTLSPAASNRVCNALALLQC
VASHPDTRILFLNAHIPLYLYPFLNTTNKTRPFEYLRLTSLGVIGALVKVDDTEVIGFLL
QTEIIPLCLRTMEMGSELSKTKKQIWIWICWYPIRIRSDFNSTWMVVATFIVQKILLDDI
GLQYICATAERFFAVGSVLANMVVSLAEQPSTRLLKHIIRCYLRLSDNPRACGALRTCLP
EMLRDGTFNNCLRDDTATRRWLQQLLHNVSGGTLVASLQAGGLDHMMAS
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggcgaacctgccccctaccctctcgataagcccttccttcgggggatccaccccttcc
tctccggcggccgccgttagtggcggtgccgccacccaagctaccaaggatcggaaaatg
gcctctgcagagcagttggttctggatctctgtgatcccgagctaagagagaatgccctc
ctcgatctctccaagaagagagagatattccaagacctagcaccgctattgtggaattca
tatggcacaatagcggcactgcttcaggagatagtttcaatataccctgctctttcgccc
ccaaccctgtcccctgcagcatcaaaccgagtttgcaatgcacttgctcttcttcagtgc
gttgcatcacatccagatactaggattcttttcttaaatgctcacatacctttgtatctg
tacccttttttaaataccactaataaaacaaggccattcgagtatttgagacttaccagc
ttgggagttattggtgcgcttgtgaaggttgatgataccgaggttatcggttttcttctt
cagacagaaataattcccctgtgtcttcgtaccatggagatgggcagtgaattgtcaaaa
acaaaaaaacaaatatggatatggatatgctggtatccgatccgtattcgatccgatttc
aactctacttggatggttgtggccacctttattgttcaaaaaattttattggacgatatt
ggacttcaatatatttgtgctactgcagagcggttctttgccgttggcagcgttttggca
aatatggtcgtatcactcgccgagcaaccctccacaaggttgctaaaacatataatacgt
tgttaccttaggctatcagacaatccaagagcatgtggagctttgcggacttgcctccct
gagatgttaagagatggaaccttcaacaattgccttcgggatgacaccgctacccgcaga
tggcttcaacagctgctacacaatgtgagtggaggaaccttagtggcctctcttcaggca
ggaggacttgatcacatgatggcaagctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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