KEGG   Egretta garzetta (little egret): 104131360
Entry
104131360         CDS       T05152                                 
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
egz  Egretta garzetta (little egret)
Pathway
egz03030  DNA replication
egz03410  Base excision repair
egz03420  Nucleotide excision repair
egz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:egz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104131360 (RFC3)
   03410 Base excision repair
    104131360 (RFC3)
   03420 Nucleotide excision repair
    104131360 (RFC3)
   03430 Mismatch repair
    104131360 (RFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:egz03032]
    104131360 (RFC3)
   03036 Chromosome and associated proteins [BR:egz03036]
    104131360 (RFC3)
   03400 DNA repair and recombination proteins [BR:egz03400]
    104131360 (RFC3)
DNA replication proteins [BR:egz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104131360 (RFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104131360 (RFC3)
Chromosome and associated proteins [BR:egz03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104131360 (RFC3)
DNA repair and recombination proteins [BR:egz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104131360 (RFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104131360 (RFC3)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_delta AAA_22 ABC_tran Rad17 AAA_16 AAA_2 RSS_P20 Sigma54_activ_2 DUF2247
Other DBs
NCBI-GeneID: 104131360
NCBI-ProteinID: XP_009642818
Position
Unknown
AA seq 388 aa
MVKFRDYSEKEQVLSGENSHTGVTGDPRNVNVANGTGTGHSVVLSGTEGPEGCHSRNPGK
HVQCGDFPHLLVYGPSGAGKKTRIMCLLRELYGPGVEKLRIEHQSITAPSKKKIEISTIA
SNYHLEVNPSDAGNNDRVVIQELLKTVAQSQQLETSTQRDFKVVLLTEVDKLTKDAQHAL
RRTMEKYMATCRLILCCNSMSKIIGPIQSRCLAVRVPAPSIEDICHVLSSVCKKEGLTLP
QELAQRLAEKSGRNLRKALLMCESCRVQQYPFTADQDIPEMDWEVYLRETANAIVSQQTP
QRLLEVRGRLYELLTHCIPPEIIMKGLLTELLNNCDGQLKGEVAQMAAFYEHRLQLGSKA
IYHLEAFVAKFMAIYKKFMEDGLDDMMF
NT seq 1167 nt   +upstreamnt  +downstreamnt
atggtcaaattcagagactactctgaaaaagagcaggtgctgagtggagagaacagccac
acgggagtaactggagacccacgaaatgtgaatgtagcaaatggcacaggaacaggtcac
tcggtggtgctgagtggaacagagggacctgaaggctgtcactctagaaaccctggaaag
catgttcagtgtggtgactttcctcatctgttggtgtatggaccatcaggagctggaaaa
aagacaagaataatgtgtttgttaagggaattatacggtccaggagtggaaaaactgagg
attgagcatcagagtataacggcaccttctaaaaagaaaattgaaattagcaccattgca
agtaattatcaccttgaagttaacccaagtgatgcaggaaacaatgaccgtgtagtaatt
caggaactcttgaagacagtagcacaatcccaacagcttgagacaagtactcaacgagat
tttaaagtggtgctgttaacagaagtcgacaaactcactaaagacgctcagcatgctttg
cgaagaacaatggagaagtacatggcgacctgcaggttgatcctgtgctgcaactccatg
tcaaaaattataggacctattcaaagcagatgcctggctgtacgagtgcctgctcccagc
attgaagatatctgccatgtgttgtccagtgtgtgtaaaaaagaaggcctgactcttcct
caggaactggctcaaaggcttgcagagaaatctggcaggaatcttcggaaggcactactt
atgtgtgagtcctgcagagtacaacagtatccttttactgctgatcaagacattcctgag
atggattgggaagtttatttgagagaaactgcaaatgccattgtcagtcaacaaacacca
caaaggcttttagaggtccgtggacgtctttatgaactcttgacacactgcattcctcct
gagattataatgaagggcctcttgacagaacttctaaataactgtgatggacaactgaaa
ggagaagttgcacagatggcggccttctatgaacaccgcctgcaactgggcagcaaagcc
atttatcatcttgaagcgtttgtagcaaaatttatggcaatttacaagaagtttatggag
gatggactagatgacatgatgttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (34)   

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