KEGG   Candidatus Erwinia haradaeae: ERCIPSTX3056_037
Entry
ERCIPSTX3056_037  CDS       T05981                                 
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
ehd  Candidatus Erwinia haradaeae
Pathway
ehd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ehd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    ERCIPSTX3056_037 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ehd03400]
    ERCIPSTX3056_037 (sbcB)
Enzymes [BR:ehd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     ERCIPSTX3056_037 (sbcB)
DNA repair and recombination proteins [BR:ehd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     ERCIPSTX3056_037 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ERCIPSTX3056_037 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ERCIPSTX3056_037 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T PI31_Prot_N Phage_int_SAM_5
Other DBs
NCBI-ProteinID: VFP86594
UniProt: A0A451DIU4
Position
1:complement(61422..62891)
AA seq 489 aa
MYIAKLYTETIFMKPTLLFYDYETFGTSPSLDRPAQFAAIRTDMDLNVIGEPETIYCCLA
NDYLPQPEAVLITGITPQIAQLRGINEASFTRRIHQIFCVPNTCIVGYNNICFDDEISRN
LFYRNFYDPYDWSWKNSNSRWDLLDVVRACFALRPDGIRWPTDTQGCPTFRLEKLTQENQ
IAHNSAHDALSDVYATIALAKLIKEKQPKLYNFLYAHRQKHKLRTLINVSQMKQLVFVSS
RFGKKRSNVTCVAPLAWHPHNKNALITCDLGGDVSSLIAIDTDLLRESLDNYHKLAQHRS
NFPLQLIHINKCPVIAPANVLRASDALRIGINLEYYADNLAKLLQNPKIREKVAQLYIIK
EKHIPLEDVDTQMYHGFFNYSDRHTIHTICHTSAKHLLTLNLTFYDKRIKQLFFRFRARN
FPDLLTPLEKIAWLQHRREILNKKRIQEYIKNIESLHTQYQYDQVKQAHLEALLDYTKDI
QFSLQTEYL
NT seq 1470 nt   +upstreamnt  +downstreamnt
atatatatagccaagctatacactgaaactatatttatgaaaccgactttactattttat
gactatgaaacttttgggacaagcccatcgttagaccggccggcacagtttgctgcaata
cgtactgatatggacttaaatgttataggagagcccgaaactatttattgctgcctagcc
aatgattatttaccgcaaccggaagcagttcttataacaggcattacaccgcaaatcgcc
cagttacgcggtataaatgaagcaagctttactcgacgtattcatcaaatattttgtgta
ccgaatacctgtattgtaggttacaacaacatttgttttgatgatgagataagccgaaat
ttattttaccgaaacttctatgatccgtatgattggagctggaagaattctaatagtcga
tgggatttattagatgtagtgagagcttgcttcgccttacgtccagatggtattcgttgg
ccaacagacactcaaggatgtcctacctttcgcttggagaagctcactcaggaaaatcag
atcgctcataacagtgcacatgacgcactatctgacgtatatgcgacaatcgctcttgca
aaattaatcaaagaaaaacaaccaaaactatataattttttatatgcgcatcgacaaaag
cataagcttcgtacattaatcaatgtttcacaaatgaaacaacttgtatttgtttcgagc
aggtttggaaaaaaaaggagtaacgtaacctgtgtcgctccactagcgtggcatccacat
aataaaaacgctttaataacgtgtgatcttgggggagatgtttcttcgctaatagcgatt
gacaccgatttgttacgcgaatctcttgataattatcacaaactagctcagcatagatcc
aactttccattacagctcattcatataaataaatgccctgttattgcgccagctaatgtc
ttacgcgcgtcagatgccctacgtatcgggataaacctagaatactatgctgataatcta
gctaaattactccaaaatccaaaaatcagagaaaaagttgctcaattgtacataataaag
gaaaaacatatccctttagaagatgtagatacacaaatgtatcatggtttttttaattac
tctgatcgccatacaatacatactatatgtcacacttctgcaaaacacctgttgacctta
aatctcacattttatgacaaacgtattaaacagcttttttttcgatttcgtgcgcgaaat
tttccagatttattaacacccctagaaaaaatcgcatggttgcaacataggcgcgaaata
ctcaataaaaaacgcatacaagaatatatcaaaaacatcgagtcactgcatactcagtat
caatatgatcaagtcaagcaagctcatcttgaggcattattagattacacgaaagatatt
cagttttctttacaaactgaatatctttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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