KEGG   Candidatus Erwinia haradaeae: ERCIPSTX3056_127A
Entry
ERCIPSTX3056_127A CDS       T05981                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau, isoform gamma
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ehd  Candidatus Erwinia haradaeae
Pathway
ehd03030  DNA replication
ehd03430  Mismatch repair
ehd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ehd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ERCIPSTX3056_127A (dnaX)
   03430 Mismatch repair
    ERCIPSTX3056_127A (dnaX)
   03440 Homologous recombination
    ERCIPSTX3056_127A (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ehd03032]
    ERCIPSTX3056_127A (dnaX)
   03400 DNA repair and recombination proteins [BR:ehd03400]
    ERCIPSTX3056_127A (dnaX)
Enzymes [BR:ehd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ERCIPSTX3056_127A (dnaX)
DNA replication proteins [BR:ehd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ERCIPSTX3056_127A (dnaX)
DNA repair and recombination proteins [BR:ehd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ERCIPSTX3056_127A (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_22 AAA_5 AAA_16 AAA_18 nSTAND3 Rad17 VapE-like_dom AAA_7 AAA_2 AAA_19 AAA_30 ResIII AAA_14 Mg_chelatase TsaE PIF1 ABC_tran DNA_pol3_delta DUF1173 AAA_assoc_2 RsgA_GTPase SKI Zeta_toxin RNA_helicase AAA_28 APS_kinase Symplekin_C
Other DBs
NCBI-ProteinID: VFP86694
UniProt: A0A451DJ20
Position
1:209347..210810
AA seq 487 aa
MSYQVLARKWRPQVFTDVIGQEHVLLTLKNALSLGRIHHAYLFSGTSGIGKTTIARILAK
SLNCETSITVDPCRVCNQCRDIAEGFCLDLIEIDAASRTKVEDIRDLLENAQYTPARSRF
KIYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTEPQKLPVTIVSRCLHLHLTVLDT
DQICMKLQNILQDENIHAELRALELLAQSADGSMRNALSLTDQAIVIGKGAVTTTAVSDM
LSILDDQYSMSLIESLVHTDGAKVMELLDQAAIRGIDWEGLLIVILGFLHRMAIMQLLPS
VISKDRSAIDYRLKSLASTVSPTDLQLYYQIILLGRKELQFAPNQRMGVEMTLLRAMAFQ
LKEAQDEEKTDRVMKDPLYHGSPSKALENLVTGVEKKKLKESFSKSLQNSNNQNSYSSKN
ATSHKKVMCIPDNNKFLIKRTPSENSAIDLKVEERENIPTSNQKTSSIVNSKKKTTISSE
YLDEGYP
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgagctatcaagtattagccagaaaatggcgtccacaagtgtttactgatgttattggt
caagagcatgtattactgacattaaaaaatgcattatctttagggcgtatacatcatgct
tatttattttcaggcacaagcggtatcggaaagactactattgcgcggatattagccaag
agtttaaattgtgagactagtattactgttgacccttgtagggtatgcaatcagtgtcgt
gatattgctgaaggcttttgtctagatcttattgagattgacgcagcttcacgtacgaaa
gttgaggatattagagatttgctagaaaatgcgcagtataccccagcccggagtcgtttt
aagatttatttaattgatgaagtgcatatgttgtcgcgtcatagctttaatgctttatta
aagactctagaggaaccaccaccacatgtaaagttcctcttagccacaacagagccgcaa
aaactaccagtaacgattgtatcgcgctgtttgcatttacacttaacagtattagataca
gatcagatttgtatgaaattgcagaatatacttcaagatgaaaatattcatgcagagctc
agagcactagagctattagcacaatcagccgatggtagtatgcgtaacgcgctaagttta
actgatcaagcaatcgtaataggaaagggggcagtgaccactactgctgtcagtgatatg
ctcagcattttggatgatcaatattcgatgtctctaatcgagagtttggttcatactgat
ggtgcaaaagtcatggagctattagatcaagcagctatacgtggcattgactgggagggt
ttgctaatagtgattcttgggtttttacatcgtatggcaatcatgcagctattaccttct
gtgatcagcaaggatagaagcgctattgattatcgattgaagtcactagcgagcacagta
tctccaactgatcttcaattgtattatcagattattctactaggacgtaaagagttacaa
tttgcacctaatcaacgtatgggggttgagatgaccctgttgcgcgcgatggcgtttcaa
ctaaaagaagcccaagacgaagaaaaaacggatagggtcatgaaggacccattataccat
ggatctccctctaaggcactggaaaatttagtgacaggtgtagagaaaaaaaaattaaag
gaatccttctccaaaagtttgcagaatagtaacaatcaaaactcgtatagcagtaaaaat
gccactagtcataagaaagttatgtgcattcctgacaataataaatttttaataaaacgt
actccatcagaaaattcagcgatagatctaaaagtagaagagcgtgaaaatatacctacc
tctaatcaaaaaacttcatctatagtcaattcgaaaaaaaaaactaccatttcaagtgaa
tatcttgacgagggatatccataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (31)   
   Pfam (31)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system