KEGG   Encephalitozoon hellem: EHEL_040210
Entry
EHEL_040210       CDS       T02287                                 
Name
(RefSeq) RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH subunit SSL1
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
ehe  Encephalitozoon hellem
Pathway
ehe03022  Basal transcription factors
ehe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ehe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EHEL_040210
  09124 Replication and repair
   03420 Nucleotide excision repair
    EHEL_040210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehe03021]
    EHEL_040210
   03400 DNA repair and recombination proteins [BR:ehe03400]
    EHEL_040210
Transcription machinery [BR:ehe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     EHEL_040210
DNA repair and recombination proteins [BR:ehe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     EHEL_040210
SSDB
Motif
Pfam: Ssl1 Tfb4 C1_4 zf-HIT
Other DBs
NCBI-GeneID: 13468192
NCBI-ProteinID: XP_003887054
Position
IV:20700..21722
AA seq 340 aa
MAKQFSWEQEYKRTWEDRNDRKVNEFNMETETFYSNNRKGIVRHLHVIVDVSEAIDKSDF
LPTFRTNVARILEDFIPSFYNENPLSTLSFLSTRDVCVKYISSMDMDIHAFLGQTGSKWF
SLLNGLEGSIEIMENTMHVKEILVIVASTSTRDPHGYTEVLNRLKTHNIKVHFISLCGEV
TLYKSISKATGGRFYVPIDVGHLSMIMKELSHPTDFNGTTLSLVKIGFPLPTMESSVCAC
HLEVKSVGYECPVCKTMVCSLPISCPICNTQLVSTLNLSKSLRFIYPLKPFIERAEDACR
ICQNKGAYQCDLCKSTYCSYCNGFVHSTLSFCIYCELPHN
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggccaaacagttttcttgggaacaggaatacaaaagaacatgggaagacagaaatgat
agaaaggtgaatgagtttaacatggagaccgaaaccttttacagtaacaatagaaagggg
atagtgaggcacctccatgtcatagtagatgtctctgaggcaatagacaagtctgacttc
cttcccacgttcaggacaaatgtggcaaggatccttgaggactttattccatcgttctac
aatgagaaccctttgtcgaccctctcttttcttagtactagagatgtttgtgtgaagtac
ataagtagtatggacatggacattcatgcatttctcggacagacaggttcaaaatggttt
tcactgctaaatggactcgagggatccatagagatcatggaaaacaccatgcatgtcaaa
gaaatccttgtaatcgttgcaagcacatctaccagagatccccatggatacactgaggta
ctaaatagactcaagacacataacataaaggtccatttcataagtctatgtggtgaggtt
actctgtataagtcaatatctaaggccactggaggaaggttttatgtcccaatcgacgtg
ggccacctatccatgatcatgaaggagctgtcccatcccacagacttcaatgggacaacg
ctcagtctagtcaaaataggctttcctctgccaacaatggaatcctcggtatgtgcctgc
catttggaagtgaagagcgttggatacgaatgcccagtatgcaagaccatggtctgctcg
cttcccatatcgtgtccaatatgcaacactcagcttgtatccacgttgaatctctcaaaa
tccctacgatttatttatccactaaagccatttatcgagagggcagaagacgcatgcaga
atatgccaaaacaaaggcgcgtatcaatgtgatctctgcaagagcacatactgcagctat
tgtaatgggttcgttcatagcactttgagcttctgtatctactgtgaattgccacacaac
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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