KEGG   Ehrlichia japonica: EHF_0862
Entry
EHF_0862          CDS       T03078                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
ehh  Ehrlichia japonica
Pathway
ehh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ehh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EHF_0862
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehh03021]
    EHF_0862
   03019 Messenger RNA biogenesis [BR:ehh03019]
    EHF_0862
Transcription machinery [BR:ehh03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     EHF_0862
Messenger RNA biogenesis [BR:ehh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EHF_0862
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N OB_RNB AAA AAA_25 AAA_22
Other DBs
NCBI-ProteinID: AHX04785
UniProt: X5H295
Position
complement(1000113..1001378)
AA seq 421 aa
MDLSELKKKTIEDLLKIAEDLGVVSNGRMLKQEIIFHLMKKVVSDGGAAIGGGVVEILSD
GFGFLRSPEANYAASGDDVYISAGQIKKFNLRTGDIVSGEIRAPSEKERYFTLVKAHSIN
FTDMAKLQRYVHFDDLIPLYPEERILLECNDPISLSKKDISMRVIDIVAPLGKGQRALIV
APPRAGKTIILQQIAHSISVNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSSTFDEPGY
RHVQLAEIVIEKAKRMVEHKKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQRP
KRFFGAARNIENGGSLTIIATALVETGSKMDEVIFEEFKGTGNCEIILDRKISDKRVYPA
IDISKSGTRKEDMLIDNVCLKKVWLLRRLLSSMGSVEAMEFLRDKLSITKDNNEFFDMMN
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
ttggatttaagtgaattaaaaaagaaaactatagaagatctgttaaaaatagcagaagat
cttggagtagtaagtaatggtagaatgctgaaacaagagataatctttcacttgatgaaa
aaagtagtaagtgatggaggtgcagcaataggaggaggggtagtagaaatattatctgat
ggttttggattcttaagatctcctgaagcaaattatgctgcaagtggtgatgatgtatat
atttctgcaggacagataaagaagtttaatttaagaacaggtgatatagtaagtggagaa
ataagagctccaagcgagaaagaaagatattttacattagtaaaagcacacagcataaac
tttacggatatggcaaaattacaaagatatgtgcactttgatgatttaattcctctatat
ccagaagaaagaatattattagaatgtaatgatcctattagcttaagtaaaaaagatata
agcatgagggtgatagatatagttgctcctttagggaaaggacagagagccctgatagtt
gcgccaccaagagctggaaaaacaataatattacaacaaatagcacattcaatatctgtg
aatcatccagatatagaattaatagttttactcataggtgaaagaccagaagaagttaca
gatatgtgtagatcggtaaaaggcgaagtagtaagctctacatttgatgaacctggatat
agacatgtacagcttgcagaaattgtaattgaaaaagcaaaaaggatggtagaacataaa
aagaatgttgtgatattgcttgattcaattacaagattagcaagagcatataactcagtg
ataccatcctcaggaaaagtattaactggtggagtggattctaatgctttacagagacca
aaaagattctttggagcagcaagaaatatagagaatggaggatcattaacaataatagcg
acagcactggttgaaactgggtcaaaaatggatgaagtgatatttgaagagttcaaagga
acaggaaattgtgaaataatattagacagaaaaatatctgataaaagagtatatccagca
atagacatttcaaaatctggtacaagaaaagaagatatgttaatagataatgtatgtttg
aagaaagtatggttattaagaagattgctatcatcaatgggttctgttgaagcaatggag
ttcttgagagataaattatccataactaaggataataatgagttctttgatatgatgaat
agttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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