KEGG   Entamoeba histolytica: EHI_038570
Entry
EHI_038570        CDS       T00238                                 
Symbol
7.t00016
Name
(RefSeq) RNA polymerase subunit Rpb8
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
ehi  Entamoeba histolytica
Pathway
ehi03020  RNA polymerase
ehi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EHI_038570 (7.t00016)
  09124 Replication and repair
   03420 Nucleotide excision repair
    EHI_038570 (7.t00016)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehi03021]
    EHI_038570 (7.t00016)
   03400 DNA repair and recombination proteins [BR:ehi03400]
    EHI_038570 (7.t00016)
Transcription machinery [BR:ehi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     EHI_038570 (7.t00016)
  RNA polymerase III system
   RNA polymerase III
     EHI_038570 (7.t00016)
  RNA polymerase I system
   RNA polymerase I
     EHI_038570 (7.t00016)
DNA repair and recombination proteins [BR:ehi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EHI_038570 (7.t00016)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG TbpB_A DUF5767
Other DBs
NCBI-GeneID: 3411179
NCBI-ProteinID: XP_656855
UniProt: C4LZP1
AA seq 143 aa
MVEVSGTFKVIAKDIGGKIFEGVSRFKLEGEDLTVFVDINTDLFPLEEHDRIKLDLTKTL
NRDGSPMDIHQGYSDNFGKNTKMDDFDYVMSGMVFKFVENKNDDNLSVIASFGGLLLMLY
GKPEKLSAYNMKDQVYLLIRKTN
NT seq 432 nt   +upstreamnt  +downstreamnt
atggttgaagtaagtggaacattcaaagtaattgcaaaagacattggcggaaagatattt
gaaggagtttcacgatttaaattagaaggtgaagatttaactgtatttgttgatataaat
actgacttatttccattagaagaacatgatcgtattaaacttgatttaacaaaaacatta
aatcgtgatggaagtccaatggatattcatcaaggttattctgataattttggtaaaaat
actaaaatggatgattttgattatgtaatgagtgggatggtatttaaatttgttgaaaat
aaaaatgatgacaatttatctgttatcgcttcttttggtggtttattactaatgctttat
ggtaaaccagaaaaactttctgcatataatatgaaagatcaagtttacttgttaattcgt
aaaaccaattaa

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