KEGG   Entamoeba histolytica: EHI_169260
Entry
EHI_169260        CDS       T00238                                 
Symbol
177.t00019
Name
(RefSeq) hypothetical protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
ehi  Entamoeba histolytica
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ehi03016]
    EHI_169260 (177.t00019)
Enzymes [BR:ehi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     EHI_169260 (177.t00019)
Transfer RNA biogenesis [BR:ehi03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    EHI_169260 (177.t00019)
 Prokaryotic type
   tRNA splicing ligases
    EHI_169260 (177.t00019)
SSDB
Motif
Pfam: RtcB UDPG_MGDP_dh_C
Other DBs
NCBI-GeneID: 3405505
NCBI-ProteinID: XP_651200
UniProt: C4M244
AA seq 524 aa
MSSGYKPGKKRIIQPIQPIKKELIDFHGCQIPKECEPYLERTNVSLIIKKGFINGMKNDA
EMFCNEDLFELLMNELLNEQPGASFSSCVRQTANVATLPGVIKSLAMPDAHSGYGFSIGG
VAAMRLDDPNAVICPGGVGFDINCGVRLLRTNLDDKDIEPHLAELADALQKNIPSGVGTT
STQTLTEKEMNEIMNEGLEWLVKKGLAWKEDLVYCEENGRIINSDPHLVSQKARGRGRNQ
LGTLGSGNHYLEIQRVDEIMDKEAAKQMGISHIGQICIMIHCGSRGLGHQVCQDFVDMCV
SQSNKNEVDIQLTGVPFQSDNGQKYFKAMNAAANYAFANRGMISYHVRCTFEQVFQKSPK
DLDMHLVYDVCHNIAKEESHLVDGKEIKCIVHRKGATRAFAPLNPVIPDAYKPIGQPAII
GGSMGTCSYMLVGTQEGMKKSFGSTCHGAGRKISRVNAMKNISSDSVVEEMKKKGIELRI
TDPKLAAEEADDAYKDVKEVVETCQSAGISRIVFKLKPLIVVKG
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgtcttctggatataaacctggcaagaaaagaataatacaacctattcaaccaattaag
aaagagttaattgatttccatggatgtcaaatacctaaagaatgtgagccttatttggaa
agaacaaatgtatctttgataattaaaaaaggatttattaatggaatgaaaaatgatgca
gagatgttttgtaacgaagacttatttgaattgttaatgaatgaattacttaatgaacaa
cctggtgcatcattttcatcttgtgtaagacaaactgcaaatgttgccacattacctgga
gttattaaatcattagctatgccagacgctcatagtggttatggattttcgattggagga
gttgctgctatgcgattagatgaccctaatgctgttatttgtccaggaggagttggattt
gatattaactgtggtgtaagattattacgaacaaatttagacgacaaagacattgaacct
catttagcagagcttgcagacgcacttcaaaagaatatccctagtggagttgggacaaca
tctacacaaacactcacagaaaaggaaatgaatgaaattatgaatgaaggtttggaatgg
ttagtaaaaaaaggtttagcatggaaagaagatttagtttattgtgaagaaaatggtaga
attatcaattctgacccccatctagttagtcagaaagcacgaggaagaggtagaaatcaa
cttgggacattaggaagtgggaaccattatctagaaatacagcgagtagatgaaattatg
gataaagaagcggctaaacaaatgggaatttcacacataggtcaaatatgtattatgatt
cattgtggtagtcgtggattaggtcatcaagtatgtcaagattttgttgatatgtgtgta
agtcaaagtaacaaaaatgaagttgatattcaattaacgggtgttccttttcaatctgac
aatggtcaaaaatattttaaagcaatgaatgcagcagcaaattatgcctttgcaaacagg
ggaatgatttcttatcatgtacgttgtacatttgaacaagtttttcaaaaatcaccaaaa
gatttagacatgcatttagtttatgatgtttgtcataatattgcaaaagaagaaagtcat
ttggttgatggtaaagaaataaaatgtattgtacatagaaaaggtgcaactcgtgctttt
gcccctttaaacccagttattcctgatgcctataaacctattggacaaccagcaatcatt
ggaggaagtatgggtacatgttcttatatgttggttggtacacaagaaggcatgaaaaaa
tcatttggatcgacttgtcatggagcaggacgtaagataagtagagtaaatgcaatgaaa
aatatttcttctgatagtgttgttgaagaaatgaagaaaaaaggcattgaactaagaata
actgatccaaaactagctgctgaggaagctgatgatgcttataaagatgtaaaagaggta
gtagagacatgtcagtcagctggaatatcaaggattgtatttaagttaaagccactaatt
gtagtaaaagggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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