KEGG   Enterobacter hormaechei CAV1176: AB284_05320
Entry
AB284_05320       CDS       T04593                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ehm  Enterobacter hormaechei CAV1176
Pathway
ehm02020  Two-component system
ehm02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ehm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AB284_05320
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AB284_05320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehm03021]
    AB284_05320
Transcription machinery [BR:ehm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AB284_05320
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: ANS16086
UniProt: A0A0A6I9R6
Position
complement(910306..911739)
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALDSNPLLEQTDLHDEVDAQQ
TQDTETLDSVDALEQKEMPDELPLDASWDEIYTAGTPSGTRADYQDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVTLDEILESIGDDEIELEEIEAVLK
RVQRFDPIGVAAKDLRDCLLIQLSQFAKETPWIDEARLIISDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTSEPEYVIPDVLVRKHNGRWVVELNADSIPRLQIN
QQYASMCTSARNDADNQYIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaattacggctcagccagcaactggccatgacgccgcagctacag
caggcaatccgtctgttgcagctgtccacgttagaactccagcaggagctccagcaggcg
ctggacagcaatccgctgctggagcaaaccgatcttcatgacgaggtagacgcccagcag
acgcaggacacagaaacgctcgactccgtagatgcgctcgaacagaaagagatgccggac
gaactgccgctggatgccagctgggatgaaatctacaccgcgggtaccccttccgggacg
cgcgcagactaccaggacgatgaactcccggtctaccagggcgaaaccacccagtcgctt
caggactacctgatgtggcaggtagagctgacccctttctccgataccgatcgcgccatt
gccacctcgattgtcgatgccgttgacgacacgggctatttgaccgtgacgctggacgag
attcttgaaagcatcggcgatgacgagattgaactggaagagatcgaagccgttctgaaa
cgcgttcagcgtttcgacccgataggtgtcgccgcgaaagatctgcgcgactgccttctg
atccagctttcgcagtttgccaaagagacaccgtggattgacgaagcccggctcatcatc
agcgatcatctggatctgctggcgaatcacgacttccgcaccctgatgcgcgtcacacgc
ctgaaagaagaggtgctgaaggaagcggtgaatctgatccagtcgctcgatccgcgtccg
gggcagtcgatccagaccagcgaaccggaatatgtcatccccgatgtgctggtgagaaaa
cacaatggccgctgggtcgttgaactgaacgccgacagcattcctcgcctgcaaatcaac
cagcaatacgcctccatgtgcaccagcgcccgtaacgacgctgataatcaatacattcgc
agcaaccttcaggaagcacgctggttgatcaagagcctggagagccgtaatgacacgctg
ctgcgcgtcagccgctgtattgtcgaacagcagcaggcgttctttgagcagggcgaagag
tttatgaaaccgatggtgctggcggacatcgcccaggccgtcgagatgcatgaatcaacc
atttcccgcgtgaccacgcagaaatatctgcacagcccacgcggtatttttgagcttaag
tatttcttctccagccacgtgaacaccgaaggcggcggcgaagcctcgtcaacggctatt
cgcgcactggtgaagaagttgatcgccgcggagaaccccgcgaagccactcagtgacagt
aagttaaccaccatgctgtccgatcagggtattatggtggcacgtcgtactgtcgcgaag
tatcgagagtctttatccattccgccgtctaaccagcgtaaacaactggtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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