KEGG   Emiliania huxleyi: EMIHUDRAFT_115056
Entry
EMIHUDRAFT_115056 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K15454  tRNA pseudouridine32 synthase [EC:5.4.99.28]
Organism
ehx  Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ehx03016]
    EMIHUDRAFT_115056
Enzymes [BR:ehx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     EMIHUDRAFT_115056
Transfer RNA biogenesis [BR:ehx03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    EMIHUDRAFT_115056
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-GeneID: 17272201
NCBI-ProteinID: XP_005779085
JGI: Emihu1_115056
UniProt: R1EUK3
Position
Unknown
AA seq 442 aa
MSTLVADADPAAVQSVTTAGIRVVAPRWVGVSLPIGRKLFSGGKLPQGEVDVTIGRGLLL
LGSFEDARGADAGVHRRTALPSYQWWIHQLESGRLPGVAASDKVGPDTVLVGRFHYHEQS
IAAQPPLEIVFEDEHFVVVNKPAGVDVLANPDAGRVANSLTGLLAEHFCAGGGGAASPLP
PLPKPAHRLDAPVSGLVCCGRTSADVRRLQRHIAARRVEKRYLARVRCVGGRAAFPPLPL
TIDAPLAFDSGRCFELMSGEARCLGAVVGKGEGKEATTVVEECWGWVASGGGGGRKGGGG
DETAVVVLRIVTGRKHQIRCHLQHAGLPIANDTRYGGAEVHAPPSAFGLPVPPPALARLL
RAGFVAGCEACAFARDLLAAAAEGGEAVGGPRVCGAIWLHSWRYAFPELGLRTATALSVT
SMALGELPRAELLREPTDNPER
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgtcgacgctcgtagcagacgccgatccagcggcggtgcagtcggtgacgacggctgga
atccgcgtcgtcgcgccgcggtgggtgggtgtgtcgctgccgatcggccgcaagctcttc
tctggcgggaagctgccgcagggagaagtggacgtgaccatcgggcgcgggttgctcttg
ctcggctcctttgaggatgcgaggggcgcggacgctggcgtccacaggaggactgcgctg
ccatcgtaccagtggtggatccatcagctggagtcgggccggctccctggcgtcgccgca
agcgacaaggtcggccccgacacggtgcttgtcggccgcttccactaccacgagcaatcg
atcgcggcacagccgcctctcgagatcgtgttcgaggacgagcattttgtcgtagtcaac
aagcccgccggcgtcgatgtgctcgccaacccggacgcagggcgcgtggccaactcgctg
accgggctgctcgccgagcacttctgcgcaggcggcggcggcgcagcctccccgctgccg
ccgcttccgaagccggctcaccggctcgacgcgccggtgtcgggtctcgtgtgctgcggc
cgcaccagcgccgacgtgaggcggctgcagcggcatatcgcggcgcgacgggtggagaag
cggtatctggcgcgcgtgcgctgcgtagggggcagagccgcgttcccgccgctgcctctg
acgatcgacgccccgctcgcgtttgatagcggccggtgcttcgagctcatgtcgggcgag
gcgaggtgcctcggcgcggtcgtcgggaaaggcgaggggaaggaggcgacgaccgtcgtc
gaggagtgctgggggtgggtcgccagcggcggcggcggcgggcgaaaaggcggcggcggc
gacgagacggcggtggtcgttctgcgcattgtcacggggcgcaagcaccagatccgctgc
catctgcagcacgccggcctaccaatcgcgaacgacacgcggtacggcggtgcggaggtg
cacgcgccgccctccgccttcggcctgcctgttccaccgcccgccctcgcgcggctgctg
cgcgccggtttcgtcgctgggtgcgaggcctgcgcttttgcgcgcgatctgctcgccgct
gcggccgaggggggagaggcggtgggcggtccgagggtgtgcggggcgatctggctgcac
tcgtggaggtacgcgttcccggagctcgggctgaggacggcgacggcgctgagtgtgacc
agcatggcgctgggcgagcttccgcgcgcggagttgctgcgggagccgacagacaacccg
gagaggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (66)   
   KEGG ORTHOLOGY (1)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (75)   

Download RDF
DBGET integrated database retrieval system