KEGG   Emiliania huxleyi: EMIHUDRAFT_225918
Entry
EMIHUDRAFT_225918 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
ehx  Emiliania huxleyi
Pathway
ehx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EMIHUDRAFT_225918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_225918
   03016 Transfer RNA biogenesis [BR:ehx03016]
    EMIHUDRAFT_225918
Enzymes [BR:ehx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     EMIHUDRAFT_225918
Messenger RNA biogenesis [BR:ehx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     EMIHUDRAFT_225918
Transfer RNA biogenesis [BR:ehx03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    EMIHUDRAFT_225918
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_14 TPR_11 TPR_19 TPR_16
Other DBs
NCBI-GeneID: 17282464
NCBI-ProteinID: XP_005789623
JGI: Emihu1_225918
UniProt: R1FUL3
Position
Unknown
AA seq 568 aa
MHKRQRTDGRAQRHEQRWNPFERDPFERAAAEPRAAQSGPAPWGTRFASLSEELRAFAAY
VALDAEEEAAREQLVALVREVVAEECAGARVEAFGSWPAGLSAFDGDVDLRVVGGTAPRR
GSRGEALLQRLGDALRPRVRSVRVITSARVPIVSLESHSSVQADVSLGSDDGATAVLTGL
ARAQPAFVPVVLALKLLLSQHALNKVYTGGVSSFRLCVMVARLFEERARSEVVEPSDLLL
RALRLYGCQMDWTATDTLPNGAGLREVIDASGLRARREASRASLAGSAPAAADRGGGGWK
AQGDEAMGSQRFELAFGSYTAAMAEPCLHGPSVAGDERQRLAVLLSNRSAAALGLSCPAQ
AEEDARRSASLQPGWGRPWARLGAALELQQRYGEAADALKRALECEPSNERWQADYRSLH
ARETSDDTRDCSSSSSGGREEHKARGNEAFRARRSAEAAGWYTRAIEADGDASSAGEASS
NGAEVAVLRSNRSAAFMKLGANSEALAEARRCVKLDASFVKGYLRLGEALGAMGRWGDAI
DALEEGLALEPAHAALQSALAQAASHSS
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgcacaagcggcagcgcaccgatggccgcgcgcagcggcacgagcagcgatggaatccg
ttcgagcgagaccccttcgagcgagcagcggcggagcctcgtgctgcgcaatcaggccct
gcaccttggggcacgcgctttgcctcgctttcggaagagctgcgtgcctttgctgcgtac
gtggcgctggacgccgaggaggaggcggcgcgcgagcagctcgtggcgctggtacgcgag
gtcgtggcagaggagtgcgccggcgctcgggtcgaggcttttggctcgtggccggcgggc
ctgtcggctttcgacggtgacgtggacctgcgggtcgtgggcggcacagcaccgaggcga
ggctcccgaggcgaggctctgctgcagcggcttggcgatgcgctgcggccgagggtgcgc
agcgtccgggtgatcacctcggcacgcgtgcccatcgtgagcctcgagtcgcacagcagc
gtccaggcggacgtgagtctcggcagcgacgacggcgcgacggcggtgctcaccggcctg
gcgcgcgctcagcccgctttcgtgcccgtcgttctcgcgctcaagctgctactgtcgcag
cacgcgctcaacaaggtgtacacgggcggcgtctcctcgttccgtctatgcgtgatggtt
gcgcggctgttcgaggagcgcgcccgctcagaggtggtggagcccagcgacttgctgctg
cgagctctccggctgtacggatgccaaatggattggaccgccaccgacaccttgccgaat
ggcgcggggctgagggaggtcattgatgcgagtggtttgcgggcgcggcgcgaggccagc
cgggcgagcttagcgggatcagccccagccgccgctgaccgcggcggcggcggctggaag
gcgcagggcgacgaggcgatgggatcgcagcgcttcgagctcgcctttggcagctacaca
gctgcaatggcggagccgtgcctacacggcccgtccgtcgccggcgacgagcggcagcgg
ctcgcggtgctgctgagcaaccgctcagcggcggcgctcggcctctcatgccccgcgcaa
gcggaggaggacgcgcggcgatcggcgagcctccaaccaggctggggcaggccgtgggcg
cggctcggcgctgccctcgagctccagcagagatacggcgaggcggccgacgcgctcaag
cgggcgcttgagtgcgagccatccaacgagcggtggcaggcggattacaggtcgctgcac
gcgcgcgagacgagtgacgacactcgtgactgcagcagtagcagcagcggtggtcgagag
gagcacaaggcgcgcgggaacgaggcgtttcgagcgcggcgctccgccgaggcggcggga
tggtacacgcgtgccatcgaggccgacggcgacgcgtcctcggcgggagaggcgagcagc
aacggagcagaggtcgctgtgcttcggagcaacagaagtgccgcgttcatgaagctcggc
gccaattccgaggcgctcgccgaggcgcggcggtgcgtgaagctcgacgcgagcttcgtc
aagggctacttgcgcttgggagaggcgctgggggcgatggggcgatggggagacgccatc
gatgcgctagaggaggggctggccctggagccggcccatgcggcgctgcagagcgcgttg
gcccaggcggcgagccacagtagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (55)   

Download RDF
DBGET integrated database retrieval system