KEGG   Emiliania huxleyi: EMIHUDRAFT_453346
Entry
EMIHUDRAFT_453346 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K12878  THO complex subunit 1
Organism
ehx  Emiliania huxleyi
Pathway
ehx03013  Nucleocytoplasmic transport
ehx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EMIHUDRAFT_453346
  09122 Translation
   03013 Nucleocytoplasmic transport
    EMIHUDRAFT_453346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_453346
   03041 Spliceosome [BR:ehx03041]
    EMIHUDRAFT_453346
Messenger RNA biogenesis [BR:ehx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     EMIHUDRAFT_453346
Spliceosome [BR:ehx03041]
 Complex C
  Other components
   EJC/TREX
    EMIHUDRAFT_453346
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    EMIHUDRAFT_453346
SSDB
Motif
Pfam: efThoc1 LprI
Other DBs
NCBI-GeneID: 17253718
NCBI-ProteinID: XP_005759997
JGI: Emihu1_453346
UniProt: R1BCY2
Position
Unknown
AA seq 468 aa
MSGDNFAAAQSRLASVLEEGVRADGLAGAAFVDSVVAAVRGAGASSGEAATSGAEGANGA
AAKAEPLDAEERGTLELSMRIFLERKSSAGAAGALVVALIDRSIELATARAADLNTPFAL
MEDLFDSQVISESEALFPQIEQRGAALAKLMRSTNNRAKLTFIRTCNELLRRLSKSKNTN
FCGRVLLLMAYMLPLSERSGVNLKGAMAPSDLELQPDEAADDKQEGSAAEDGSLYASFWG
LQAAFADPAAAVKPESWATLVSRLETVLQEAAEKLRARAFELFAGIAPNGPLFAAALERL
LVRERHWLEWKRDGCAAFDRAATEAESAPLAAGGAKKRRSGAAARAGGKRQQLGNSELSR
LWNLGDNSLASIAAEGNKQAVPSLSAYLQPLVEQLDPEAGIEKEYLLTNDKVWMWKALRL
MSKKDVSLLGKISAQGGSMEAAVNHFVEKQKGNAGGEEGGEATAMETE
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgtcgggtgacaacttcgccgccgcgcagtcgcgcctcgcctcagtcctagaggagggc
gtgcgggccgacgggctggcgggcgccgcctttgtcgacagcgttgtcgccgccgtcagg
ggcgcgggcgcaagcagcggcgaggcggcgacgagcggcgcagagggggccaacggcgcg
gcggccaaggcggagccgctcgacgcggaggagcggggcacgctcgagctgtcgatgcgc
atcttcctcgagcgtaagtcgagcgccggcgcggccggcgcgctggtcgtcgcgctgatc
gaccggtcgattgagctggcgacggcgagggcggcggacctgaacacgccgttcgcgttg
atggaggacctcttcgactcgcaggtcatctccgaatcggaggcgctcttcccgcagatc
gagcagcgcggcgcggcgctcgccaagctgatgcgctcgaccaacaaccgcgccaagctg
accttcatccgcacctgcaacgagctgctccgccggctctcaaagtcgaagaacaccaac
ttttgcgggcgcgtgctgctgctcatggcgtacatgctcccgctctcggagcgctccggt
gtcaacctcaagggcgcgatggccccctccgacctcgagctccagcccgacgaggcggca
gacgacaagcaggaggggagcgcggcggaggacgggtcgctgtacgcctccttctggggg
ctgcaggccgccttcgccgaccccgccgccgccgtcaagccagagtcatgggccactctc
gtctcgcgcctcgagaccgtgctgcaggaggcggccgagaaactgcgcgcgcgcgccttc
gagctgttcgccggcatcgcacccaacggccctctcttcgcggcggcgctcgagcggctc
ctcgtgcgggagcggcactggctcgagtggaagcgcgacggctgcgccgccttcgaccgg
gccgccaccgaggcggagagcgcgccgctggcggcgggcggcgccaagaagcggcgcagc
ggcgcggcggcgcgcgcgggcggcaagcggcagcagctgggcaactcggagctgtctcgg
ctgtggaacttgggcgacaactcgctcgcgtcgatcgccgcggaggggaacaagcaggcg
gtgccgagcctgtctgcgtacctgcagccgctcgtcgagcagctcgaccccgaggcgggg
atcgagaaggagtacctgctcaccaacgacaaggtctggatgtggaaggcgttgcgcctg
atgagcaagaaggacgtctccctcctcggcaagatctcggcgcagggagggtcgatggag
gcggccgtcaaccactttgtcgagaagcagaagggcaacgccggcggcgaggagggcgga
gaggccaccgcgatggagaccgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (86)   
   KEGG ORTHOLOGY (1)   
   RefGene (81)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (97)   

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