KEGG   Emiliania huxleyi: EMIHUDRAFT_558364
Entry
EMIHUDRAFT_558364 CDS       T02915                                 
Symbol
COPA1-1
Name
(RefSeq) COPA1, alpha subunit of the coatomer
  KO
K05236  coatomer subunit alpha
Organism
ehx  Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ehx04131]
    EMIHUDRAFT_558364 (COPA1-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ehx04147]
    EMIHUDRAFT_558364 (COPA1-1)
Membrane trafficking [BR:ehx04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    EMIHUDRAFT_558364 (COPA1-1)
Exosome [BR:ehx04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   EMIHUDRAFT_558364 (COPA1-1)
  Exosomal proteins of bladder cancer cells
   EMIHUDRAFT_558364 (COPA1-1)
SSDB
Motif
Pfam: Coatomer_WDAD COPI_C WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 17253092
NCBI-ProteinID: XP_005759442
JGI: Emihu1_558364
UniProt: R1BBF2
Position
Unknown
AA seq 1250 aa
MLTKFETKSNRVKGLAFHSSRPWVLASLHNGVVQLWDFRMGTLIDRFDEHDGPVRGVCFH
QSQPLFVTGGDDYKIKVWNYKLRRCLFSLLGHLDYIRTVQFHVEHPWIVSASDDQTIRIW
NWQQRSCVSVLTGHNHYVMCAQFHVKDDLVLSASLDQTVRVWDIGGLRKKTLPETVTPEE
RSAMGPPMPDPAGSSPGGSLSSKLGKAIPNMKVEDLFGGNDATVKYVLEGHDRGVNWASF
HSTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHINNVSCALFHPKQELIISNSEDKSI
RVWDMSKRQGVQTFRREHDRFWILAVHQESNLLAAGHDGGMIVFKLERERPAFTPISGGV
LFVKDRYVRSFDYGSGKDTALMSIRRSGNSGGPAVHYNEQENMLLVCHDTDGGSYELYSV
PRDGRSSDQSQECKRGAGSSAVFVARQRFAVLDKNRQILIKNFQNEVTKKCAPPHASTDC
LFPVGTGMLLLRSEERISLFDVQQRKAVAELSTPAVKYVVWSPDNSHVALLSKHGVVIAN
KKLEQLCMVHETIRIKSGAWDGNEVFVYSTLNHIKYCLINGDSGIIRTLDVPVYISRVSG
GTVHCLDREGKVRKMVVDVTECQFKLSLHKKEFERVIRIIKQSRLSGHAIIAYLQKKGFP
QVALHFVSDEQTRFNLAVECGNVDIALQAAQALDSKENWHRLGAEALKHGNHQVVEMAYQ
RTKDMEKLSFLYLMTGNIDKLKKMLKIAEMRSDVMGRFHNALYLGDVPERVKLLVEAGHI
PLAYITALTYGLTEQAEALSQQLTAAGLPLPEPLSPAPKMLYPALPISRDSNWPLLTVSK
GTFERTLAGGGGGGATADSGLGDAGLDLDDMDGGGGWGDDDLDLDGTGGGGGGGGGDPLG
DDADPLGGEGADGDGWGTEELDLGDLPGGSERASMGGGYYVAPNVGMPLTTRWSRESRLA
ADHAAAGSFESAMQLLQRQFGLARLEPLRGAFLALAASSQSVLAPAPSLPSLQAPLTRPG
GWPCVCISLGSLVEKLKAAYGLVTGGKFAEALDAFKSIMGSIALALALSRQQVAELKELL
GICREYITGLRLELLRRTLGADEKVRACELAAYFTHCNLQPAHMILALRSAMNISWKAKL
KRSAAAFARRLLELNPKPEFAQTARKVIQACESDLTDDFTMAYDERNPFVVCNKSFVPIY
RGSEIAYSSFCRAPYLPKFKGAVCEVDGIGQVGGEGTGFSEVDADGKFLS
NT seq 3753 nt   +upstreamnt  +downstreamnt
atgctgaccaagttcgagaccaagtcgaaccgcgtcaagggcctcgcattccactcgagc
cggccgtgggtgctcgcgtcgctgcacaatggcgtcgtgcagctgtgggactttcggatg
gggacgctgatcgaccggtttgatgagcacgacgggccggtgcgcggggtgtgcttccac
cagagccagccgctcttcgtcaccggcggcgacgactacaagatcaaggtttggaactac
aagctgcggcgctgcctgttttcgctgctcggccacctcgactacatccgcaccgtgcag
ttccacgtggagcacccgtggatcgtgtcggcgtcggacgaccagacgatccgcatctgg
aactggcagcagcgctcgtgcgtctccgtcctcaccggccacaaccactacgtcatgtgc
gcgcagttccacgtcaaggacgacctggtgctgtccgcctcgctcgaccagacggtgcgt
gtgtgggacatcggcgggctgcgcaaaaagacgctgcccgagacggtcacgccagaggag
cgtagcgccatggggccgcccatgcccgaccccgccggcagcagccccggagggtcgctc
tcgagcaagctcggcaaggcgatcccaaacatgaaggtcgaggacctcttcggaggcaac
gacgcgacggtcaagtacgttctcgaggggcacgaccgcggcgtcaactgggcctccttc
cactccaccctcccgctcatcgtctctggcgccgacgaccggcaggtcaagctctggcgg
atgaacgagaccaaggcgtgggaggttgacacgctgcgcggccacatcaacaacgtctcg
tgcgccctcttccacccaaagcaggagctcatcatctcaaactcggaggacaagtcgatc
cgcgtgtgggacatgtccaagcggcagggcgtgcagaccttccgccgcgagcacgaccgc
ttctggatcctcgccgtgcaccaggagtccaacttgctcgccgcgggccatgacggcggc
atgatcgtcttcaagctcgagcgcgagcggccggccttcactccaatctccggtggcgtg
ctcttcgtcaaggaccggtacgtgcgctcgttcgactacggctccggcaaggacacggcg
ctcatgtcgatccgccgctcgggcaactcgggcggccccgccgtccactacaatgagcag
gagaacatgctgctcgtctgccacgacaccgacggtggctcctacgagctctactcggtg
ccgcgcgacggccgctcgtcggaccagtcgcaggagtgcaagcgcggtgcgggcagctct
gccgtgtttgtcgcgcggcagcgcttcgccgtgctggacaagaaccggcagatcctgatc
aagaacttccagaatgaggtgacgaagaagtgcgcaccgccgcacgcttcgaccgactgc
ctcttccccgtgggcaccggcatgctgctgctgcgctccgaggagcgcatctcgctcttt
gacgtgcagcagcgcaaggcggttgccgagctgtcgacgcccgccgtcaagtacgtggtc
tggtcgcccgacaactctcacgtcgccctgctctcgaagcacggcgtcgtcatcgcaaac
aagaagctcgagcagctctgcatggtgcacgagacgatccggatcaagtcgggcgcgtgg
gacggcaacgaggtgttcgtctactcgaccctcaaccacatcaagtactgcctcatcaac
ggcgattcgggcatcatccgcacgctcgacgtgcccgtctacatctcgcgcgtctctggc
ggcaccgtgcactgcctcgaccgggagggcaaggtgcgcaagatggtggttgacgtgacc
gagtgccagtttaagctctcgctgcacaagaaggagtttgagcgcgtgatccgcatcatt
aagcagtcgcgcctctcgggccacgccatcatcgcctacctgcagaagaaaggcttcccg
caggtcgccctccactttgtctcggacgagcagacgcgcttcaacctggccgtcgagtgc
ggcaacgtcgacattgcgctgcaggcggcgcaggcgctcgactcgaaggagaactggcac
cggctgggcgccgaggcgctcaagcacggcaaccaccaggtggtggagatggcctaccag
cgcaccaaggacatggagaagctctccttcctctacctgatgacgggcaacatcgacaag
ctcaaaaagatgctcaagatcgcggagatgcgctccgacgtgatggggcgcttccacaac
gcgctctacctcggcgacgtgcccgagcgcgtcaagctgctcgttgaggcgggccacatc
ccgctcgcctacatcacggccctcacgtacggcctcaccgagcaggccgaggccctctcg
cagcagctcaccgcggccgggctcccgctacccgagccgctctcgcccgcgccgaagatg
ctctaccccgcgctgcccatctctcgcgacagcaactggccgctcctcaccgtctcaaag
ggcaccttcgagcgcacgctcgccggcggcggcggcggcggcgccaccgccgactcgggc
ttgggcgacgcggggctcgaccttgacgacatggacggcggcggcgggtggggggacgac
gacctcgacctggacggcaccggcggcggcggcggcggcggcggcggcgacccgctcggc
gacgacgcggacccgctggggggcgagggcgcggatggggacgggtgggggacggaggag
ctggacctgggcgacctgccgggcggcagcgagcgcgcgtcgatgggcggcgggtactac
gtcgcgccaaacgtggggatgccgctgacgacgcgctggtcgcgcgagtcgcgcctcgcg
gcggaccacgccgccgccggctctttcgagtcggcgatgcagctgttgcagcgccagttt
gggctcgcgcggctcgagccgctgcggggcgccttcctcgcgctcgccgcatcgtcgcag
tcggtgctcgcgccggcgccgtcgctgccgtcgctgcaggcgccgctcacccggccgggc
ggctggccgtgcgtgtgcatcagcctcggctcgctcgtcgagaagctcaaggcggcgtac
ggactcgtcaccgggggcaagtttgccgaggcgctcgacgccttcaagagcatcatgggg
agcatcgccctcgcgctggcgctgtcgcggcagcaggtggcggagctcaaggagctgctc
ggcatctgccgcgagtacatcaccggcctccgcctcgagctcctccgccgcaccctcggc
gccgacgaaaaggtgcgcgcgtgcgagctcgccgcctacttcacgcactgcaacctgcag
ccggcccacatgatcctcgcgctccgctcggcgatgaacatctcgtggaaggccaagctc
aagcgctccgccgccgcctttgcgcgccggctcctcgagctcaacccgaagcccgaattc
gcgcagacggcgcgcaaggtgatccaggcttgcgagtcggatttgaccgatgacttcact
atggcgtacgacgagcgcaacccgtttgtcgtgtgcaacaagtcgtttgtgcccatttac
cgcggctcggagatcgcctactcctcgttctgcagggcgccctacctgcctaagttcaag
ggcgccgtgtgcgaggttgacgggattggccaggtcggcggcgaggggactggattcagc
gaggtagacgccgacggcaagtttctctcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (395)   
   KEGG ORTHOLOGY (1)   
   RefGene (390)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (407)   

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