KEGG   Emiliania huxleyi: EMIHUDRAFT_56892
Entry
EMIHUDRAFT_56892  CDS       T02915                                 
Name
(RefSeq) Oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ehx  Emiliania huxleyi
Pathway
ehx03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    EMIHUDRAFT_56892
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_56892
   03009 Ribosome biogenesis [BR:ehx03009]
    EMIHUDRAFT_56892
Messenger RNA biogenesis [BR:ehx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EMIHUDRAFT_56892
Ribosome biogenesis [BR:ehx03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    EMIHUDRAFT_56892
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-GeneID: 17252800
NCBI-ProteinID: XP_005759079
JGI: Emihu1_56892
UniProt: R1CWB1
Position
Unknown
AA seq 180 aa
PLFWLDLEMTGLDSRRDVILEAAMLASDSQLLRTVDGPEIVIHHADPVLAGMNEWSRQQH
DRSGLTERSRLSTTSLAAAEAALLAFVETHCPGDAKAVLAGACVYKDLEFVEVHMPRLRA
RLSHRVVDVSTVRHLAHAWYPGAARKARAALSAHAYTHRALDDVRHSIAELRYWREHCFR
NT seq 540 nt   +upstreamnt  +downstreamnt
ccactcttctggctggatttggagatgacgggtctcgacagccggcgtgacgtcatcctt
gaggcagcgatgcttgccagcgacagccagcttcttcggaccgtggatgggcctgagatt
gtcatccaccacgcggacccggtcctcgccggcatgaatgagtggagccgccagcagcac
gaccgatctgggctgactgagcgatcccgactgagcaccacgagcctcgctgcggccgag
gcggcgctgctcgcttttgtggagacgcactgccctggcgacgcaaaggctgtgcttgcg
ggcgcgtgcgtctacaaagacctcgagtttgtggaggtgcacatgccgcggctacgcgcg
cggctgtcgcatcgcgtggtggatgtgtccaccgtgaggcacctcgcccacgcgtggtac
cctggtgcggctcgcaaggcccgcgccgccctctccgcgcacgcgtacacgcaccgcgcc
ctcgacgacgttcgccacagcatcgcagagctgcgatactggcgagagcactgcttcaga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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