KEGG   Emiliania huxleyi: EMIHUDRAFT_77336
Entry
EMIHUDRAFT_77336  CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
ehx  Emiliania huxleyi
Pathway
ehx03022  Basal transcription factors
ehx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EMIHUDRAFT_77336
  09124 Replication and repair
   03420 Nucleotide excision repair
    EMIHUDRAFT_77336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehx03021]
    EMIHUDRAFT_77336
   03400 DNA repair and recombination proteins [BR:ehx03400]
    EMIHUDRAFT_77336
Transcription machinery [BR:ehx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     EMIHUDRAFT_77336
DNA repair and recombination proteins [BR:ehx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     EMIHUDRAFT_77336
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 zinc_ribbon_15 RUBY_RBDX IBR
Other DBs
NCBI-GeneID: 17252427
NCBI-ProteinID: XP_005758707
JGI: Emihu1_77336
UniProt: R1B9F3
Position
Unknown
AA seq 389 aa
MEEDAEAEPQSYAWESELQRTWDAVEETADGSLRSAAAGSWRPGEKPSVQVGVRRGVMRA
VLLVLDCSRHAAEHDVEMKPSRLSVMCDAASDFAGRFFEQNPVSTLAVLVTRREKAEALT
QLSCNVRQHQQALRALAACAIGDASLQNALELARDTLSSVASFVSREVPPLVCLPSSRDA
GDLLASLSSIAASRVRCSVISLLAEVCIYRRIARETGGEYGVALSQPHLRELLLRLLPPR
PVCQLAPTNSLVKVGFPSRVPPGGAPALTYSAGSSKPEVRADGGFACPQCGVLHAELPTE
CPVCALKLLSATDLSKTYHHLFPLPLFKQQLGPPAALCFGCGEALPAAARNAAPATHGFT
CGACGAAFCEHCDALLHESLHACPSCEGP
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggaggaggacgccgaggccgagccccaatcctacgcgtgggagtcggagctgcagcgc
acctgggacgccgtcgaagagacggccgatggcagccttcgctccgccgccgctggctcc
tggcggccaggcgagaagccgagcgtgcaggtcggcgtgcggcgaggcgtgatgcgcgcc
gtgctgctggtgctggactgctcgcgtcacgccgccgagcacgacgtcgagatgaagccc
tcgcgcctctccgtcatgtgcgacgccgcgagcgactttgccggccgcttctttgagcag
aacccagtctcgacgctcgcggtgctggtcacgcggagagagaaggcggaggcgctcacg
cagctgtcgtgcaacgtgcggcagcaccagcaggcgctccgggccctcgccgcctgtgct
ataggtgacgcgtcgctgcagaacgcgctcgagctcgcccgcgacacgctctcctcggtc
gcgtccttcgtctcgcgcgaggtccctcctctcgtctgcttacccagctctcgtgacgca
ggcgacctgctcgcctcgctctcctcgatcgccgcgtcgcgcgtccgctgctccgtcatc
tccctcctcgccgaggtctgcatctacaggcgcatcgcccgcgagactggcggcgagtac
ggcgtcgctctctcccagccacacctccgcgagctgctgctgaggctgctgccgccgcgg
cccgtctgccagctcgcgccgaccaactcgctggtcaaggttggcttccccagccgcgtg
ccgccgggcggcgctccggcgctcacctactcggcgggctcctccaagcccgaggtgagg
gccgacggagggtttgcgtgccctcagtgcggcgtgctgcacgcagagcttcccaccgag
tgccctgtctgcgccctcaagctcctctcggcgacggacctctcaaagacgtaccaccac
ctcttcccgctcccgctcttcaagcagcagctcggcccgcccgccgcgctctgcttcggc
tgcggagaggcgctgcccgccgccgcgcgcaacgccgcgccggcgacgcacggcttcaca
tgcggcgcgtgtggcgccgcgttctgcgagcactgcgacgcgctgctgcacgagtctctc
cacgcgtgcccctcttgtgaaggtccttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (66)   

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