KEGG   Edwardsiella ictaluri: NT01EI_0808
Entry
NT01EI_0808       CDS       T00912                                 
Name
(GenBank) exodeoxyribonuclease V, beta subunit, putative
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
eic  Edwardsiella ictaluri
Pathway
eic03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:eic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NT01EI_0808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eic03400]
    NT01EI_0808
Enzymes [BR:eic01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     NT01EI_0808
DNA repair and recombination proteins [BR:eic03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NT01EI_0808
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_25 AAA_11
Other DBs
NCBI-ProteinID: ACR68029
UniProt: C5BH93
Position
809142..812741
AA seq 1199 aa
MTPSTPPVPCAPMPMPTQTLDPLTLPLYGARLIEASAGTGKTFTLAALYLRLLLGLGEEN
AYPRPLAVEEILVVTFTEAATEELRGRIRSNIHALRLACLRGESDHPLLTDLLAQIADQA
LAASLLLAAERQMDEAAIYTIHGFCQRMLSHNAFESGVLFQQTLLQDELPLRRQACADFW
RRHCYPLSADLAEAVSQLWSGPEALLAELQPYLSGEMPLLRPAPDAQETLAQRHQVLLAR
IERVKATWREHEHQVVGLIAASGVDKRSYSSRYLPKWLDEMSVWAQAESRDYQLPSAIAR
FAQATLLEKTSKGEPPRHSVFTEIESLLAEPLSLRDLVLARALGEIRDGVQLEKRRRAEL
GFDDLLTRLDQALGGAGGAALAAAIRQRYPVAMIDEFQDTDPLQYRIFQRIYTADDARSS
ETALLLIGDPKQAIYAFRGADIFTYLRARAAVDACYTLETNWRSAPGVVQAVNALFLRLE
APFLFAEIPFLPVASAAANAGRRLTIDGEPQSAMALWLYDVPGCTAQEYLQTMARCCAAQ
IRDWLSAGQRGTARLTGGDDGKAGRALCAADMTILVRSRHEATVMRDALSALNIPSVYLS
NRDSVFSTPEARDLLWLLQAILTPAQSRTLRSALAVGLLGLDAAALDALSQDERRWDAVV
DEFDGYRRQWQRRGVLPMLRELIGRRRLAENLLATAGGERRLTDVLHLGELLQEAAAQLD
SEPALVRWLAQQIDSPQPQAESQQMRLESDRHLVQVITIHKSKGLEFPLVFLPFVATFRR
QRQGLYHDRVTHQAVLDLCADDDALALADQERLAEDLRLLYVAVTRAVYHCALGIAPLVS
GNRRKQDESDLHHGAIGYLLQRAEACDAEGLKQALQTLSNDPIHLEILSPCEGTPWQAEP
VPPRALCARRFTRRLQDDWRVTSYSALQQHGGSTYLELLPRLDIDAAGENRTAAATIFSA
HTFPRGAAPGTFLHDLLEKLDFAAAPDPVWLAEQCLAQGIDLAWVPTLAQWLTQILQTPL
DESGLTLSHLAPSQRQPELQFYLPIARPLRAEALDALIRRHDALSAQCEALAFSQVEGML
KGFIDLVFCHRGRYYLLDYKSNWLGEDRAAYTPPAMAAAMIAHRYDLQYQLYTLALHRYL
RHRLVDYDYQRHFGGVFYCFLRGMAGVEPGQGVFACRPEEALVTALDALFAGEQEDGDA
NT seq 3600 nt   +upstreamnt  +downstreamnt
atgacgccgtcgactccgccggtgccgtgcgcgccgatgccgatgccgacgcagacgctg
gatccgctgaccctgccgctgtacggcgcccgtctgatcgaggcctccgccggtaccggg
aagacgtttaccctggccgcgctctacctgcgcctgctgctgggcctgggggaggaaaac
gcctatccgcgcccgttggcggtagaggagatcctggtggtgacctttaccgaggccgcc
accgaggagctgcgcggccgcatccgcagcaatattcacgcgctgcggctggcctgcctg
cgcggcgagagtgaccatccgctgctcaccgacctgctggcgcagatagccgatcaggca
ctggcggcttctctgctgctggcggcagaacggcagatggatgaggcagccatctacacc
attcatggcttctgccagcgcatgctcagccacaatgccttcgagtccggggtgctgttt
cagcagactctgctgcaggacgaactgccgctgcgccgtcaggcctgcgctgacttctgg
cggcgccactgctatccgctctccgccgatctggcggaggcggtcagccagctgtggagc
ggtccagaggcgctgttggccgagctacagccctatctgtccggcgagatgccgctgctg
cgtccggcgcccgacgcacaggagacgctggcacagcgtcatcaggtcctgctggcccgc
attgaacgggtcaaggccacgtggcgggagcatgagcatcaggtggtcggccttatcgct
gcctcgggcgttgataagcgcagctacagcagccgctatctgcccaaatggctggatgag
atgtcggtctgggcgcaggcggagagccgtgactatcagctgccgtcggcgatcgcgcgc
tttgcgcaggcgacgctgctggagaaaaccagcaagggggagccgccgcgccatagcgtg
ttcacggagattgagtcgctgctggccgagccgctgtcgttgcgcgatctcgtgctggcg
cgggcgctcggtgaaatccgtgacggcgtgcagctggagaagcgccgccgggccgagctg
ggctttgacgacctgctaacccggctggatcaggcgctgggcggcgcgggcggcgcggcg
ctggccgcggcgattcgccagcgttatccggtggcgatgatcgatgagttccaggatacc
gaccccctgcagtaccgcatcttccagcggatttataccgcagacgatgcccggtcgtcc
gagaccgcgctgttgctgatcggcgatcccaaacaggcgatttacgcctttcgcggtgcg
gatatcttcacctatctgcgcgcgcgcgcggcggtggacgcctgctataccctggagacc
aactggcgctcggcgcccggcgtcgtacaggccgtcaacgcgctgttcttacgcctggag
gcgccgtttctgttcgcagagatcccctttttaccggtggcctccgccgcggccaacgcg
gggcgccgactgacgatcgacggtgagccccagtcggcgatggcgctgtggctgtatgat
gttcccggctgcaccgcgcaggagtatctgcagacgatggcgcgctgctgcgcggcgcag
atccgcgactggctcagcgccggtcagcggggcaccgcgcggctgaccggcggcgatgac
ggcaaggcgggacgcgcgctgtgcgccgccgacatgactatcctggtgcgcagccgccac
gaagcgacggtgatgcgcgatgcgctgagcgcgctcaatatcccctcggtctatctttcc
aatcgcgacagcgtcttctcgacgccggaggcgcgcgacctgctgtggctgctacaggcg
atcctgacgccggcccagagccgaaccctgcgcagcgcgctggccgtaggtctgctgggg
ctggatgcggcggcgttggacgcgctgagtcaggatgagcggcgctgggatgcggtggtg
gatgagtttgacggctatcgccgccagtggcaacgccgcggggtgttgccgatgctgcga
gagctgatagggcgccgccgcctggcggagaacctgctggcgaccgcgggcggagagcgt
cgcctgaccgacgttctgcacctgggcgagctgctgcaggaggccgcggcgcagctggac
agcgagccggcgctggtgcgctggctggcccagcagatcgacagcccgcagccgcaggcg
gaaagccagcaaatgcgtctggagagcgatcgccatctggtgcaggtgatcaccattcac
aaatccaaagggctggagtttccgctggttttcctgccctttgtggcgacgttccgccgt
cagcggcaggggctgtaccatgacagggtcacccaccaggcggtgttggatctgtgtgcg
gacgatgatgcgctggcgctggcggatcaggagcgactggcggaggatctgcgcctgctg
tatgtcgccgtgacgcgtgccgtgtatcactgtgcgctgggtatcgccccgctggtgtct
ggaaaccgccgtaaacaggatgagagcgatctgcatcacggcgccatcggctacctgctg
cagcgcgccgaggcttgcgatgccgaggggctgaagcaggcgctgcaaacgctgtcgaat
gacccgatccacctggagatcctctctccctgcgagggaaccccgtggcaggctgagccg
gtaccgccgcgcgcgctctgcgcccgccgctttacccgtcgtctgcaggatgactggcgg
gtgaccagctactccgcgctgcagcagcacggcggtagcacctatctggagctgttgccg
cgcctggatatcgatgccgccggcgagaatcgcacggcggcggcgacgatcttcagcgcc
cacacctttccgcgcggcgcggcgccgggaacctttttacacgacctgctggagaagttg
gacttcgccgcggcgccggatccagtgtggctggccgagcagtgcttggctcaggggatc
gatctggcgtgggtgccaacgctggcgcagtggctgacgcagatcctgcagacgccgctg
gatgagagcgggctgaccctgagccatctggccccgtcgcagcgccagcccgagctgcag
ttttatctgccgattgcccgcccgctgcgggcggaggcactggatgcgctgatccgccgc
cacgatgcgttgtcggcgcagtgcgaggcactggcgttcagccaggtcgagggcatgctg
aagggctttatcgatctggttttctgccaccgggggcgctactacctgctggactataag
tccaactggctgggtgaggatcgggcggcctatactcccccggcgatggcggcggcgatg
atcgcccaccgctatgacctgcagtatcagctgtataccctggcgctgcaccgctatctg
cgccatcggttggtggattatgattatcagcgccattttggcggcgtcttttactgtttt
ctgcgcggaatggcgggcgttgaaccggggcagggggtctttgcctgtcgtcccgaagag
gcgctggttacggcgctggatgcgttgtttgccggggaacaggaggatggcgatgcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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