KEGG   Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_2920
Entry
ECOK1_2920        CDS       T01997                                 
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
eih  Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Brite
KEGG Orthology (KO) [BR:eih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eih03009]
    ECOK1_2920 (srmB)
Enzymes [BR:eih01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     ECOK1_2920 (srmB)
Ribosome biogenesis [BR:eih03009]
 Prokaryotic type
  rRNA helicases
   ECOK1_2920 (srmB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 CMS1
Other DBs
NCBI-ProteinID: ADE89334
Position
3009591..3010925
AA seq 444 aa
MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV
HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL
GKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPRVKKRH
RDTKNIGKRRKPSGTGVPPQTTEE
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggaagccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccacgtaagaaatccggtccgccgcgtattttg
atcctcaccccaactcgcgagctggcgatgcaggtggccgatcatgcccgcgaactggcg
aaacatacgcatctggatattgccaccatcaccggcggcgtggcttatatgaaccacgca
gaagtgttcagcgaaaaccaggacattgtggtcgccacgaccggacgtctgctgcaatac
ataaaagaagagaacttcgattgccgcgcggttgaaacgctgatcctcgacgaagcagac
cgtatgctggatatgggcttcgcccaggatatcgaacatattgctggcgaaacgcgctgg
cgtaaacagaccctgctcttttcggcaacgctggaaggcgatgcgattcaggactttgcc
gagcgtctgttggaagatccggtggaagtttctgccaatccgtccacccgtgagcgcaaa
aaaattcatcagtggtattaccgcgccgatgatcttgagcataaaaccgcgttgctggtg
catctgttaaaacagccggaagcgacccgctcaattgtgtttgtgcgtaagcgtgagcgt
gtgcatgagctggcaaactggctgcgcgaagcaggcatcaacaactgctatctcgaaggt
gagatggtacaaggcaagcgtaacgaagcgattaaacgcttgaccgaaggccgcgtaaac
gtactggttgctaccgatgttgccgcgcgcggtatcgacattccggatgtcagccacgtc
tttaacttcgatatgccgcgcagtggcgatacttatttgcaccgtatcggacgtaccgcg
cgcgccggtcgtaaaggcaccgcgatttcgctggtggaagcccatgaccatctgctgctg
ggcaaagttggccgttatattgaagagccaattaaagctcgcgtaattgatgagttacgt
ccgaaaacgcgtgcgccaagcgagaagcagaccggcaagccatcgaagaaagtgttggct
aaacgtgccgagaagaaaaaagctaaagagaaagagaagccgcgggtgaaaaaacgccat
cgcgacactaaaaatattggtaagcgccgtaaaccaagcggaacgggcgtgccaccgcaa
acgacagaagagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system