KEGG   Encephalitozoon intestinalis: Eint_110090
Entry
Eint_110090       CDS       T02238                                 
Name
(RefSeq) RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH subunit TFB3
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
ein  Encephalitozoon intestinalis
Pathway
ein03022  Basal transcription factors
ein03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ein00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Eint_110090
  09124 Replication and repair
   03420 Nucleotide excision repair
    Eint_110090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ein03021]
    Eint_110090
   03400 DNA repair and recombination proteins [BR:ein03400]
    Eint_110090
Transcription machinery [BR:ein03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Eint_110090
DNA repair and recombination proteins [BR:ein03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Eint_110090
SSDB
Motif
Pfam: zf-C3HC4_5 MAT1 zf-C3HC4 zf-RING_5 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX ZNF512_C2H2 TF_Zn_Ribbon zinc-ribbons_6 zf-RING_16 zf-RING_4 TRAF3_RING zf-UDP
Other DBs
NCBI-GeneID: 9699586
NCBI-ProteinID: XP_003073871
UniProt: E0SA86
Position
XI:complement(11615..12298)
AA seq 227 aa
MEERRCPVCKSDIYLNPDIVIYIGPCFHKMCESCMLRIFSRGQAPCPECGTVLRKINYIK
PTFEDIIVEKECKIRRTLLRVFGREEEEFDGDVVKYNNYLERFEELVFEILSFKTESLVK
ERIREIQEMGHNSILNPVPKVGPNKGKNILPARKRQIGSLDEKSEAKTQKTGIANDYFDP
EELPRIIEKSMKEIYLPEGFLQPNIPGGLSYDAVVSFAILSIENPSI
NT seq 684 nt   +upstreamnt  +downstreamnt
atggaagaaaggagatgtcctgtatgtaagagcgatatctatttgaatccggatatagtg
atatacataggtccttgctttcataagatgtgcgaatcctgtatgcttaggatatttagt
aggggacaggcaccttgccctgaatgcggaacggtactaagaaagataaactatattaag
ccaacttttgaggatataattgttgaaaaggaatgcaagatcaggaggactcttctaagg
gtctttgggagagaagaagaggagtttgatggggatgttgtcaaatataacaattatctt
gaaagatttgaagagcttgtgtttgagattttgagcttcaaaaccgaatctcttgtaaaa
gagagaataagagagattcaagaaatgggacataattctattctcaatcctgttccaaag
gttggccctaataagggaaagaacatacttccagcgagaaaaaggcaaatcgggagcttg
gacgagaaaagcgaggccaagacacaaaaaactggtattgctaatgattactttgatcca
gaagaacttccaagaataatagaaaagtctatgaaggaaatttatttaccagagggcttt
ctacagcctaatattcctggaggattatcgtacgatgcagttgtgtcttttgcaatattg
tcaatagagaatcctagtatttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

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