KEGG   Erysipelothrix inopinata: H9L01_05090
Entry
H9L01_05090       CDS       T06822                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
eio  Erysipelothrix inopinata
Pathway
eio03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eio00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H9L01_05090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eio03019]
    H9L01_05090
   03009 Ribosome biogenesis [BR:eio03009]
    H9L01_05090
Enzymes [BR:eio01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     H9L01_05090
Messenger RNA biogenesis [BR:eio03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     H9L01_05090
Ribosome biogenesis [BR:eio03009]
 Prokaryotic type
  rRNA helicases
   H9L01_05090
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_19 Flavi_DEAD AAA_22 CMS1 Phage_integrase AAA_30
Other DBs
NCBI-ProteinID: QNN61734
UniProt: A0A7G9S1K9
Position
1049769..1051217
AA seq 482 aa
MTFERFNLNEKTIQALDKLGYTEPTDVQKEAILPILKGRDVLIKSQTGSGKTASFGIPII
DKTDWDIRTPQTIVLTPTRELALQVRDELSNIGRYHRLNVQAVYGKDSFKLQKRDLSQRT
HIVVATPGRLYDHLTQDTIDVSKVKTLVIDEADEMLSMGFIEQIEDILSFMPERIQVILL
SATFPEEIKKLSDEVLRGPIEINVVSTNNVGNRIIQESYRTTSEEKLALLHEVLIVKNPD
HGIIFANTKEAVNNIEAYLSEFGVNIRKLHGDMDQKDRTQTIHDFKTGKFRFLVATDVAS
RGLDIHDVSIIINYDTPHHLETYTHRIGRTARLDKEGLAVSLLDDDDAYWIGSNGISEVY
EITAMKKPSESLVEARQELFLKKQNRKQKPRETQEAVFKEDIMKLHIRGGKNNKIRPGDI
VGVITSISGITFEDIGVIQVLEDSTYVDIHNGKGNTVLKYLQNHPIKGKQRRVGKAYNDV
IR
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgacgtttgagagatttaatttaaatgaaaagacaatccaagcattggataagttggga
tatactgaacctacagatgtacaaaaggaagccattcttccaatactaaaaggaagagat
gtactcatcaaatcgcaaacaggaagtgggaaaactgcctcttttggtattcctattatt
gataaaacggattgggatatccgtacacctcaaacaatcgtattaacacctactcgtgaa
cttgcgctacaagtgcgtgatgaactttctaatattggtcgttaccaccgacttaatgtt
caagcagtttacgggaaagattcatttaaactacagaaaagagatctgtctcaacgtacg
catattgttgttgctactcctggacgactttatgatcatttaacacaagatacaattgat
gtttcgaaagtaaaaacgttggtaattgatgaagctgatgaaatgttaagcatgggattc
atcgaacaaattgaagatatcttaagcttcatgcctgaaagaattcaagtgattctcttg
tcagcgacattcccggaagagattaaaaaattatctgatgaagttctaagaggacccatt
gaaattaatgttgtctctacaaacaatgttggaaaccgtatcattcaagaatcttaccga
acaacgagtgaagaaaaacttgcgctattgcatgaagtattaatcgtgaagaatcctgat
catggaattatctttgcgaatactaaagaagctgtgaacaacatcgaagcatacttaagt
gaatttggagtaaatattcgtaaacttcatggtgatatggatcaaaaagatcgtacacag
acaattcatgattttaaaacagggaaatttagattcctcgttgcgacagatgttgcgtct
cgtggattagatattcatgatgttagcattatcattaattatgatacaccgcaccacctt
gaaacgtatacccatcgaattggacgtacagcacgattggataaagaaggacttgcagtt
tcattacttgatgatgatgacgcatactggattggtagtaacggaatttccgaagtttat
gagattactgcaatgaaaaaaccaagtgaatctctggttgaagcaagacaagagctattc
ttgaagaaacaaaaccgtaaacaaaagcctcgtgagacccaagaagccgtgtttaaggaa
gatatcatgaaattacatattcgtggtggtaaaaacaataaaatacgtcctggtgatatt
gtgggggttattacgagcatctcaggaattacatttgaagatattggagttattcaagta
ttggaagattcaacatatgtcgatattcataatggcaaaggaaacaccgtacttaagtat
ctacaaaatcatccgattaaaggaaaacaacgtcgtgtaggtaaagcctataacgatgtc
atacgataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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