KEGG   Entamoeba invadens: EIN_486830
Entry
EIN_486830        CDS       T04133                                 
Name
(RefSeq) histone deacetylase Rpd3, putative
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
eiv  Entamoeba invadens
Pathway
eiv03082  ATP-dependent chromatin remodeling
eiv03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:eiv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    EIN_486830
   03083 Polycomb repressive complex
    EIN_486830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:eiv03036]
    EIN_486830
Enzymes [BR:eiv01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     EIN_486830
Chromosome and associated proteins [BR:eiv03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     EIN_486830
   HDAC complexes
    Sin3A-HDAC complex
     EIN_486830
    BRAF-HDAC complex
     EIN_486830
    REST complex
     EIN_486830
    SHIP complex
     EIN_486830
    MiDAC complex
     EIN_486830
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     EIN_486830
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    EIN_486830
  Chromatin remodeling factors
   NuRD complex
    EIN_486830
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 14888100
NCBI-ProteinID: XP_004255992
UniProt: A0A0A1U4Q3
Position
Unknown
AA seq 450 aa
MTRVFYFYDHNVGEFDYGFGHPMKPLRNKLVHHLIMSYGVYQRLNIYKPWRATNEQLEMF
HSKEYIEFLQRVTPSKALLPYFRRSLEEFNFTVDDCPVFDGLYPFVQTVVGSTIGCAMKI
NERAADVCINWSGGLHHAKKSQASGFCYINDIVCGIMELLKVHSRVLYIDIDHHHGDGVE
EAFKATNRVMTISLHKYGDNYFPGTGDVDEVGVEEGKNYSINVPLKDGINDESYHKLYMP
IIDRAMEVFQPGAVVMQCGADSLNGDRLGFFNLSIQGHCACMTHVKKFGVPMILVGGGGY
TVSNTARCWCYETAAACDLSIPDQIPINDYLEYYVPDMRITIPTSAQMKNCNSRNYCEDI
LGKVLSVLDEVGNSNLPIMQFVNPPRRDEHTVDMEIDEDAETYQDACEGFKRDIPMNMDN
EDVVKFFTEPLPIYPKSKLFCTESDLKTME
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgacgagagtgttctacttctatgaccacaacgttggagagtttgactacgggtttgga
catccgatgaaaccccttcgaaataagttggtgcaccatttgatcatgtcatatggtgtc
tatcaaagactgaacatctacaaaccttggagagctacaaatgaacaactcgagatgttc
cattcaaaggaatatatcgagtttcttcagagagtcaccccaagtaaggcactgttgcct
tacttcagaagatcgttggaagaattcaacttcactgtcgatgactgccccgtctttgat
ggcctgtacccgtttgtccaaacggtagttgggagcacgattgggtgtgcgatgaaaatc
aacgagcgtgctgcggatgtatgcatcaattggtcaggtgggcttcatcatgcgaagaag
tcgcaagcgtctgggttttgttacatcaatgacatagtctgtgggataatggaactgtta
aaagtgcattctcgtgtgttgtacattgatatcgaccatcatcatggtgatggtgttgaa
gaagcgttcaaagcgacgaatcgagtgatgacgatctctcttcacaaatatggagacaat
tattttccagggacgggtgatgtcgatgaggttggggtagaagaggggaagaattattcc
atcaatgtcccattaaaggatgggatcaatgatgaaagttatcataaattatatatgcct
atcatagatcgtgctatggaagtctttcaaccgggtgccgtcgttatgcaatgtggggct
gattctttgaatggtgatcggctcggcttctttaatctaagtatacaaggacactgcgcc
tgtatgactcatgtcaagaaattcggtgtccctatgatccttgtgggcgggggtgggtat
actgttagtaacaccgcaaggtgctggtgctatgagacagccgcagcttgtgacttgagt
atccccgatcagatcccaatcaacgactatctcgaatactacgtgccagacatgcgaatc
acgatacccacaagcgcacaaatgaagaattgtaactcgcgtaattattgtgaagacata
cttgggaaggtgttgagtgtacttgatgaggttggtaactcgaatttgccgatcatgcag
tttgtgaaccccccacgacgtgatgaacacaccgtggatatggaaatagacgaggacgca
gaaacatatcaagacgcttgtgagggattcaaaagagacatcccaatgaatatggataac
gaggatgtggttaagttcttcacagagccgttaccaatatacccaaagtcaaagctcttc
tgcacagaaagcgacttgaaaactatggaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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