KEGG   Escherichia coli KO11FL: EKO11_4321
Entry
EKO11_4321        CDS       T01718                                 
Name
(GenBank) histone family protein DNA-binding protein
  KO
K05787  DNA-binding protein HU-alpha
Organism
eko  Escherichia coli KO11FL
Brite
KEGG Orthology (KO) [BR:eko00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:eko03032]
    EKO11_4321
   03036 Chromosome and associated proteins [BR:eko03036]
    EKO11_4321
   03400 DNA repair and recombination proteins [BR:eko03400]
    EKO11_4321
DNA replication proteins [BR:eko03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    EKO11_4321
Chromosome and associated proteins [BR:eko03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    EKO11_4321
DNA repair and recombination proteins [BR:eko03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      EKO11_4321
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 DUF2267
Other DBs
NCBI-ProteinID: ADX52879
Position
complement(4561965..4562237)
AA seq 90 aa
MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagactcaactgattgatgtaattgcagagaaagcagaactgtccaaaacccag
gctaaagctgctctggagtccactctggctgcaattactgagtctctgaaagaaggcgat
gctgtacaactggttggtttcggtaccttcaaagtgaaccaccgcgctgagcgtactggc
cgcaacccgcagaccggtaaagaaatcaaaattgccgcagctaacgtaccggcatttgtt
tctggcaaggcactgaaagacgcagttaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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