KEGG   Elizabethkingia miricola: VO54_03726
Entry
VO54_03726        CDS       T03757                                 
Symbol
rhlE_3
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
elb  Elizabethkingia miricola
Pathway
elb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:elb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VO54_03726 (rhlE_3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:elb03019]
    VO54_03726 (rhlE_3)
Enzymes [BR:elb01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     VO54_03726 (rhlE_3)
Messenger RNA biogenesis [BR:elb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     VO54_03726 (rhlE_3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 UTP25 SNF2-rel_dom UvrD-helicase ERCC3_RAD25_C Flavi_DEAD SERF-like_N
Other DBs
NCBI-ProteinID: AJW65152
Position
3988769..3989962
AA seq 397 aa
MNFIQDFMENLIHLKPEKGNFRTMNFKSLNLINPIIRAITEAGYSKPTDIQNMAIPHILE
GKDIIGCAQTGTGKTAAFAMPVLQLLKKKNPEHKEIRTLILTPTRELAIQIEENFKVYSK
YLPLSQLCVFGGVGKGSQIAALRKRVDVLIATPGRLLDLCSDGHVNLSKIEILVLDEADR
MLDMGFVNDVKKILRLTPSKKQTLFFSATMPVSIRKFANTIVKNPVEVSVTPVSSTAKTI
EQSVYFVDKNRKTDLLINLLEDSSISRLLVFTRTKHGADRLVKQLGHTGIFAAAIHGNKS
QQARQKALEDFKKSKVRVLIATDIAARGIDIDELSFVINYELPNIPETYVHRIGRTGRAG
MEGKAVSFCDEDERSDLKNIQKLIGFTMPVGNQAGLY
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgaattttattcaggattttatggaaaacctgattcacttaaagcctgaaaaaggcaat
ttcagaacaatgaattttaaaagtttaaatttaataaatcctattatccgtgccataaca
gaagccggatattcgaagcccaccgatatccagaatatggcgataccgcatattcttgag
ggaaaagatattattggctgtgcacagaccggaaccgggaaaacggcagcatttgcaatg
cctgttctacaattacttaaaaagaaaaacccagaacataaagaaatccgaacacttatt
ctaacccccacacgggagctggcaatacagattgaggaaaattttaaggtttatagtaaa
tatctgccattgtcacagctttgtgttttcggtggcgttggtaaaggaagccagattgca
gccttaagaaaaagagtagatgtattgatcgccacaccgggaagacttttagatttgtgc
agcgatggacatgtgaatctttccaaaattgaaattctggtactggatgaagcagacaga
atgcttgatatgggttttgtgaatgatgtgaaaaagattctcaggttaacaccctcaaag
aaacagacgctgtttttctctgcaaccatgcctgtttctatacggaaatttgcaaataca
attgtgaaaaaccctgtagaagtatcggtgacacctgtttcatcaactgcaaaaactata
gaacagtctgtatattttgttgataaaaatagaaaaactgatttacttatcaatcttctg
gaagactctagtattagccgcttattggtttttacgcgaaccaaacacggagcagaccga
ttggtaaaacaactgggacacacaggaatctttgccgcagcaattcacggaaacaaatcc
caacaagctaggcaaaaagcacttgaagactttaaaaagagtaaggttcgtgttttaatc
gctactgatattgccgcacgtggaatcgatatcgatgaactttctttcgttatcaattat
gaactcccgaatatcccggaaacttatgttcaccgaataggcagaaccggaagagccgga
atggaaggaaaagcagtttctttttgcgacgaggatgaacgttctgatttaaagaatatt
caaaagctcataggctttacaatgcctgtaggaaatcaggctggcttatactaa

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