KEGG   Escherichia coli clone D i14: i14_3453
Entry
i14_3453          CDS       T02003                                 
Name
(GenBank) putative binding protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
elc  Escherichia coli clone D i14
Pathway
elc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:elc00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    i14_3453
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:elc02000]
    i14_3453
Transporters [BR:elc02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    i14_3453
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: AER90908
Position
complement(3466260..3467930)
AA seq 556 aa
MSKQCHRRIVVGLIISPVRNTMYTRNLLWLVSLVSAAPLYAADVPANTPLAPQQVFRYNN
HSDPGTLDPQKVEENTAAQIVLDLFEGLVWMDGEGQVQPAQAERWEILDGGKRYIFHLRS
GLQWSDGQPLTAEDFVLGWQRAVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKA
TDDRTLEVTLEQPVPWFTTMLAWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDKWVV
NEKITARKNPKYRDAQHTVLQQVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIEKSL
PGELRIIPRLNSEYYNFNLEKPPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATTLTPPE
VKGFSATTFDELQKPMSERVAMAKVLLKQAGYDASHPLRFELFYNKYDLHEKTAIALSSE
WKKWLGAQVTLRTMEWKTYLDARRAGDFMLSRQSWDATYNDASSFLNTLKSDSEENVGHW
KNAQYDALLNQATQITDATKRNALYQQAEVIINQQAPLIPIYYQPLIKLLKPYVGGFPLH
NPQDYVYSKELYIKAH
NT seq 1671 nt   +upstreamnt  +downstreamnt
ttgagcaaacaatgccacaggcgtattgttgtcgggcttataatttctccggtaaggaat
accatgtatacgcgaaatttattatggctggtcagcctggtaagtgcggctcctctctac
gctgctgacgttcccgccaacacaccgctcgccccgcaacaagtctttcgttacaacaat
catagcgacccaggcacgctcgacccgcaaaaggtagaggagaatactgccgcgcagatt
gtgctggatctgtttgaaggtctggtatggatggacggtgaaggccaggtgcagcccgct
caggctgaacgctgggagatacttgacggcggcaagcgctatattttccatctgcgtagc
ggtttgcagtggtcagacggtcagcctctgacggcagaggattttgtcctcggctggcag
cgcgcggttgacccgaaaacggcaagcccttttgctggctatctggcacaggcgcacatt
aacaatgccgcggctattgttgcgggtaaagcagatgttacatcgctgggtgtcaaagcg
acggatgatcgtactcttgaagttacgcttgagcagccagttccttggttcacgacgatg
ctcgcctggccgacgctgttcccggttcctcatcatgtcatcgctaaacatggcgatagc
tggagtaagccagagaacatggtttacaacggtgcctttgtgcttgataaatgggtagtt
aacgaaaagattactgcacgcaaaaatccaaagtaccgcgatgcgcaacatacagtattg
caacaggttgagtatctggcgctggataattcggtcaccggctataaccgctatcgcgcg
ggagaggtcgatctcacctgggttccggcgcagcaaattcccgccattgaaaaatcactg
cctggcgagctacgaattatcccgcgtctgaacagcgaatattacaactttaaccttgag
aaaccgccatttaacgatgtgcgggtgcgtcgggcgctatatcttacggttgatcgacag
cttattgcgcaaaaggtactggggttgagaacgcccgcaaccacgctgacgccgccagag
gtaaaaggctttagcgcgacgacgttcgatgaactgcaaaagccaatgagtgagcgtgtc
gcgatggcaaaagtcttgctgaaacaggcgggatacgacgcctctcatccgctacgcttt
gagctgttctacaacaagtacgatctgcatgaaaagaccgcgatagcgttgtcttccgaa
tggaaaaaatggctgggtgcacaggtgacgctgcgcacaatggagtggaaaacctatctt
gatgcccgacgagccggtgattttatgctgtctcggcagtcgtgggatgcgacgtacaat
gatgcctccagcttcctgaacacgctcaaaagcgatagtgaagaaaacgtcggtcactgg
aaaaatgcgcagtatgacgccttactaaaccaggccacgcagatcactgatgcaacaaag
cgtaatgcgttgtatcagcaggcagaagtgatcatcaaccagcaggcaccgctgattccc
atctactatcagccgttaatcaaactgcttaaaccctacgttggcggttttccgctgcat
aatccccaggattatgtctacagcaaagagttgtatatcaaggcacattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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