KEGG   Escherichia coli LF82: LF82_026
Entry
LF82_026          CDS       T00854                                 
Name
(GenBank) hypothetical protein
  KO
K11900  type VI secretion system protein ImpC
Organism
elf  Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:elf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:elf02044]
    LF82_026
Secretion system [BR:elf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LF82_026
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: CAP74794
Position
complement(259992..261476)
AA seq 494 aa
MSVKEEIAPVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAE
PINILAVDAMIADIDARTSRQMDAIIHAPEFQELESLLRSLKLLVERADTRENIKVHFLN
VTQEELLDDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYI
SQVSAMAHSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGL
TAPRFLLRHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNI
IGPSSGGAVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACF
FSANSVQKPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSD
LERELNTWIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMG
ASFDLSLVGRLDKE
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgtcagtaaaggaagaaattgctcccgtcagcgcgtctcaaaccgccgcgcccccatct
ctgcttgatgaaatcatggcgcaaacccgcgtccagcctaaatcagaaagctacgatatc
acccgccagggcgtgagcgcctttattgccgccatgttacagggcgacagtagcgctgaa
cctatcaatatcctggccgttgacgccatgattgctgatattgatgcccgaaccagcagg
cagatggatgccattattcatgccccggagtttcaggaactggaatccctgctgcgctcg
ctgaagctgctggttgaacgcgcggatacacgggaaaacatcaaagtccatttcctgaat
gtcactcaggaagaactgctggatgatttcgaatttgcacctgaaatcacgcagtctgcg
tattacaagcatgtatattcaagcggttacggacaatttggcggtgagccagtggcggcg
gtaatcggcaactttgcctttaagaacaccacgccggatatgaagctgctgaaatatatc
agccaggtcagcgcgatggcgcacagcccgttcctgtcgtcagtatcatccgaatttttc
ggtctggattcatggacagagttaccggggatcaaagaaccgggtgccatctttgaaggc
ccggcctactcccgctggcgcgccctgcgtgaatcggaagattcccgttacctgggcctg
accgccccccggttcctgctgcgccacccttactcaccggatgaaaaccctgtcaaaacc
ttccgttaccatgaagatgtcagccagagtcatgagtcttatctgtgggggaatacctcg
tttttactggccgccaacctggcggaaagttttgctaagtatcgctggtgcccaaatatt
attggcccttccagcggcggcgcagtcaaagacctcccggtgcatctgtatgaatccatg
gggcaaatgcaggcaaaaattccgactgaagtgttgatcactgaccggagagagtatgag
ctggcggaagagggctttatcacactgaccatgcgtaaagggtctgataatgcgtgcttt
ttctcggccaactcggtgcagaaacccaaaacattccccaaaacccccgaaggcaaggct
gcggagaccaactataaactcggcacccagctgccatacttgtttgttatcagcaggtta
gcgcattacatcaaggtaattcagcgcgaacagcttggctcatggaaagaacgtagtgac
ctggagcgtgagctgaacacctggattcgccagtatgttgctgaccaggaaaatccgcct
gccgaagtccgcagccaccggcctttgcgtcaggctaagatcgaggtactggatgtggat
ggtgagccgggctggtaccaggtcgcgatttctgtcagaccgcattttaaatacatgggt
gccagtttcgacctgagcctggtcggacgactggataaggaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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