KEGG   Escherichia coli LF82: LF82_0430
Entry
LF82_0430         CDS       T00854                                 
Symbol
dacB
Name
(GenBank) Penicillin-binding protein 4
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
elf  Escherichia coli LF82
Pathway
elf00550  Peptidoglycan biosynthesis
elf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:elf00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    LF82_0430 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:elf01002]
    LF82_0430 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:elf01011]
    LF82_0430 (dacB)
Enzymes [BR:elf01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     LF82_0430 (dacB)
Peptidases and inhibitors [BR:elf01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   LF82_0430 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:elf01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   LF82_0430 (dacB)
SSDB
Motif
Pfam: Peptidase_S13 Beta-lactamase2 Transpeptidase
Other DBs
NCBI-ProteinID: CAP77642
Position
3372781..3374214
AA seq 477 aa
MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP
ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV
TTLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS
APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE
PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK
IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS
RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS
LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgcgattttccagatttatcatcggattgaccagctgtatagcgttcagtgttcaggcc
gcaaatgttgatgagtacattactcaactccccgcaggtgccaaccttgccctgatggtg
caaaaagtcggcgcgtcggcccccgctattgattaccacagtcagcagatggcgctaccc
gccagtacgcagaaagtgattactgcgctggcggcgttgattcaactcggccccgatttt
cgttttaccacgacgcttgaaaccaaaggcaatgtggaaaacggcgtacttaagggtgac
ttagtagcgcgatttggtgccgatccgacgttaaaacgtcaggatattcgcaatatggtc
acgactttgaaaaaatctggcgtcaaccaaatcgatggcaatgtgttgatagatacctcc
attttcgccagccacgataaagctcccggctggccatggaatgacatgacacaatgcttt
agcgctccgcctgccgccgccatagttgaccgcaactgtttctccgtctcgctctacagt
gccccaaaacctggtgatatggcttttatacgcgtggcatcttattaccccgttacgatg
ttcagccaggtacgcaccctcccccgtggttctgccgaagcgcaatactgcgaactggat
gtcgtaccaggtgacctgaaccgctttacgctaacgggatgcctgccacaacgttctgag
ccgctcccgttggcttttgccgtgcaggatggtgccagctatgccggggcaattctgaaa
gatgagttaaaacaggcgggtatcacctggagcggaacgctgctgcgccagactcaggtt
aacgaacctggaacggtagttgccagtaaacagtcggccccgctgcacgatctgcttaag
attatgctgaaaaagtcggacaacatgattgccgatacggttttccgcatgatcggccat
gcgcgcttcaatgtgcctggaacatggcgggccggatcggacgccgtgcgtcagatcctg
cgccagcaagccggtgtcgatatcggaaacaccattattgccgatggttcagggctttcg
cggcataacctgattgcccccgccaccatgatgcaggtgctgcaatatattgcccaacac
gacaatgaacttaactttatctccatgctgccgctggcgggctatgacggctctttgcag
taccgtgcaggtctgcatcaggcgggcgtggatggaaaagtctcagcgaaaaccggttcg
ttgcagggggtatataacctggcgggattcattaccacagcgagcgggcaacgaatggcg
tttgtgcaatatctttctggctatgcagtagaaccggcggatcagcgtaatcgccgtatt
ccgttagtgcgttttgaaagccgtttgtataaagatatttatcagaataattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system