KEGG   Escherichia coli LF82: LF82_1900Help
Entry
LF82_1900         CDS       T00854                                 

Gene name
rluD
Definition
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
elf  Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:elf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:elf03009]
    LF82_1900 (rluD)
Enzymes [BR:elf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     LF82_1900 (rluD)
Ribosome biogenesis [BR:elf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LF82_1900 (rluD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: PseudoU_synth_2 S4 S4_2 TruB_N
Motif
Other DBs
NCBI-ProteinID: CAP77039
Structure
PDB: 

Position
complement(2715175..2716155)
Genome map
AA seq 326 aa AA seqDB search
MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVL
GGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDLVVHPGAGNPDGTVLNALL
HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT
AGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM
AHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAP
IPEDMVELIEVMRADFEEHKDEVDWL
NT seq 981 nt NT seq  +upstreamnt  +downstreamnt
atggcacaacgagtacagctcactgcaacggtgtccgaaaaccaactcggtcaacgctta
gatcaggctttggccgaaatgttcccggattattcacgttcgcgaataaaagaatggatc
ctcgaccagcgcgtgctggttaacggcaaagtttgtgataagccgaaagaaaaagtattg
ggtggcgagcaggtggccatcaacgctgagattgaagaagaagcgcgttttgaaccgcag
gatatcccgctggatatcgtctatgaagatgaagatatcatcgtcattaataaaccacgc
gacctggtggtacatcctggcgcgggtaacccggatggtacggtactgaatgcgttgctt
cattactatccgcccattgccgatgtaccgcgtgcgggcatcgtccatcgtctggataaa
gacaccaccggcctgatggttgtggcaaaaaccgttccggctcagacgcgtttagtcgaa
tctttgcaacggcgtgaaattactcgtgagtatgaagcggtggcaattggtcatatgacc
gctggcggtacagtagatgaaccaatcagccgccacccgaccaaacgtactcacatggcg
gtgcatcccatgggcaaaccggcggtcactcactatcgcatcatggaacacttccgtgtg
cacacgcgtctgcggttgcgtctggaaaccggacgtacgcaccagatccgcgtgcatatg
gcgcatattacccatccgctggtgggcgatccggtttatggtggccgtccgcgtccgcca
aaaggtgcttcggaagcgtttatctccacgctgcgtaagtttgaccgccaggcgcttcat
gcaaccatgctgcgtctttatcacccgatctccggtatcgaaatggaatggcatgcgcct
attccagaagatatggtggagctgattgaggtgatgcgcgccgatttcgaagagcataag
gatgaagtggactggttatga

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