KEGG   Williamsoniiplasma luminosum: ELUMI_v1c03340
Entry
ELUMI_v1c03340    CDS       T05209                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
elj  Williamsoniiplasma luminosum
Pathway
elj03030  DNA replication
elj03430  Mismatch repair
elj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:elj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ELUMI_v1c03340 (dnaE)
   03430 Mismatch repair
    ELUMI_v1c03340 (dnaE)
   03440 Homologous recombination
    ELUMI_v1c03340 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:elj03032]
    ELUMI_v1c03340 (dnaE)
   03400 DNA repair and recombination proteins [BR:elj03400]
    ELUMI_v1c03340 (dnaE)
Enzymes [BR:elj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ELUMI_v1c03340 (dnaE)
DNA replication proteins [BR:elj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ELUMI_v1c03340 (dnaE)
DNA repair and recombination proteins [BR:elj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ELUMI_v1c03340 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2
Other DBs
NCBI-ProteinID: ATZ17059
UniProt: A0A2K8NTE5
Position
409552..412485
AA seq 977 aa
MKFSPQLNVRTEYNFQESLIRIKDYISFAKKHDFSFVFYAENKSMFGVADFYNQAKKNNL
KPIIGLAIDNPETNKTTLLYAKNKTGFQNLSFLSSWLMENNLTNFDQEFFDVFNQAISDT
FLISEDDQIVEKYGAIVHQLFIPKISYLTSDEYENFIVLSAIKNNLTLKEISNVQDEHYF
SDEEMQNKNPIDQKQQISQIAEACNFNLFDNSGQYHIANFKTPDNLPINIYLKQLCEEAL
LKYFNESKTFIEQTDYLKRLTYELSVIDKMGFNNYFLIVWDYVKFAKSQDIIVGPGRGSS
AGSLVAFLLEITQIDPIKYNLLFERFLNPERATMPDIDIDFQDDRREEVVEYLFNKYGAH
NVAMISTFQTIGAKSAIRDVARAYDINLEIVNAITKNIDLNYQNDLKSAVANNAQLKQYQ
TEYPELFEAANTLIGLPRQTSTHAAGVVLSDVDLRTILPIKIGFNGIYQTQFDMNFLETL
GLIKMDILGLRNLTTLQLIQNNILRSRQIKIKLENIDLNLPEVFKTLNAGDTSGIFQLES
PGMTNLIKKMEVNSIEDISIASALFRPGPQEMIEEFIERKKGKKQNYLIDQTLKDILNPT
FGIIVYQEQVIQILGLVANFSFAKSDIVRRAMGKKDYKYMESMKTEFISQAIKNNYSPEN
ANTIWDWIEKFASYGFNKSHSIAYSYISYWLAYFKTKYPSEFYAALLSGVIGNETKMTQY
LNEAKRKDIIVKSPNVANMSFNYNSSQKLLFLPLTTIKGIGNEFIRKLREAYQNDKNLFS
SIFYFTTKMLNNGLNKNLFKALIWSGAFDEFKYSRQTLDENIDQIFSFAEFNKNTKIIDE
KLVPILEVQKDVPTVVSAKEKEYLGFYVSTHPITTIKAENKDLKAVGIDFIKENQGFTRI
IGEIQNIKIFKDKNQNDMAFIEVGDETDTISVTIFASLFEQMNELIKLNSILAMDVKMQK
YKNTISASLIKIVKVLK
NT seq 2934 nt   +upstreamnt  +downstreamnt
atgaagttttcaccacaattgaatgttcgaactgaatataattttcaagagtctttaatt
agaatcaaagattatatttcttttgctaaaaaacatgatttttcatttgttttttatgct
gaaaataaatcaatgtttggtgttgctgatttttataaccaagctaaaaaaaacaattta
aaaccaattattggtttagcaattgacaatcctgaaacaaataaaacgacacttttatac
gccaaaaacaaaacgggttttcaaaatttgtctttcttatcttcgtgattaatggaaaat
aatttgacaaattttgatcaagaattttttgatgtttttaatcaagcaataagtgatacc
tttttgatttctgaagatgaccaaattgttgaaaaatatggtgcaattgttcaccaatta
tttattcctaaaattagctatttaacaagcgatgaatatgagaatttcattgttctttca
gcgattaaaaataacctaacacttaaagaaatttccaatgttcaggatgaacattatttt
tctgatgaagaaatgcaaaataaaaatccaattgatcaaaaacaacaaattagtcaaatt
gctgaagcatgcaattttaatttatttgataattctggacaatatcatatcgctaacttt
aaaactccagataacttaccaattaatatttatttgaaacaattgtgtgaagaagcctta
ttaaaatatttcaatgaaagtaaaactttcattgaacaaactgactatctaaaacgtcta
acatacgagttatcggtgattgataaaatgggctttaataactattttttaattgtttga
gattatgtaaaatttgctaaaagtcaagacattattgttggtcctggtcgtggttctagt
gctggatcattggttgcttttttattggaaatcactcaaattgatccaatcaaatacaac
ttattatttgaacgttttttaaatcctgaacgagcaacgatgccagatattgatattgat
tttcaagatgatagaagagaagaagtggtcgaatatttatttaataaatatggtgctcat
aatgttgcaatgatttcaacttttcaaacaattggggccaaatctgcaatcagagatgtg
gcaagagcttacgatattaatttagaaatagtcaatgcaattactaaaaatattgatcta
aattatcaaaatgatttaaaatcagcagttgcaaataacgctcaattaaaacaatatcaa
acagagtatccagaactttttgaggctgctaacaccttgattggattgcctcgtcaaacc
agcacacatgcagctggagtggttttatcagatgttgatttaagaacaattttaccaatt
aaaattggattcaatggtatttatcaaacgcagtttgatatgaattttttagaaacttta
gggttaatcaaaatggatattttaggcttaagaaatctaacaaccctccaattaattcaa
aataacattttaagaagtcgccaaatcaaaatcaaattagaaaacattgatttaaattta
cctgaagttttcaaaactttaaatgctggtgatacttccggaatttttcaattagaatca
cctgggatgactaatttaattaaaaaaatggaagtcaattcaattgaagatatttcaatt
gcttcagctttatttcgaccaggtccacaagaaatgattgaagaatttattgaaagaaaa
aaaggcaaaaaacaaaactatttaattgatcaaactttgaaagatattttaaacccaact
tttggaatcattgtttatcaagaacaagtgattcaaattttaggattggtggcaaatttt
tcttttgccaaatcagatattgtgcgaagagcgatggggaaaaaagattacaaatatatg
gaatcaatgaaaactgaatttatctctcaagcaattaaaaataattactccccagaaaat
gctaatacaatttgagattgaattgaaaaatttgcctcatatggatttaacaaatcacac
tcgattgcctactcatacattagttattgattagcttattttaaaactaaatatccatca
gaattttatgcagctttattaagtggagtgatcggaaacgaaaccaaaatgactcaatat
ttgaatgaagcaaaaagaaaagacattatcgttaaaagtcctaatgttgccaacatgagt
tttaattataattcaagtcaaaaactcttgtttttgcccttgaccacaatcaaaggaatt
ggtaatgaatttattagaaaattaagagaagcttatcaaaatgataaaaatttatttagt
tcaattttctattttacaaccaaaatgcttaataatggactaaacaaaaatctttttaaa
gcgttgatttgatctggtgcttttgatgaatttaaatatagcagacaaacccttgatgaa
aatattgatcaaattttttcttttgcagaatttaataaaaacaccaaaattattgatgaa
aagttagttccgattttagaggttcaaaaagatgtaccaacagttgtttctgcaaaagaa
aaagaatatttaggcttctatgtttcaacccacccgattacaaccattaaagcagaaaac
aaagatttgaaagcagttgggattgatttcatcaaagaaaatcaaggttttacaagaatt
attggtgaaatacaaaatatcaaaattttcaaagacaaaaatcaaaatgatatggctttc
attgaggttggtgatgaaactgataccatttctgtcacaatttttgcttcactttttgaa
caaatgaacgaattaattaagttaaattcaattttagcaatggatgtaaaaatgcaaaaa
tataaaaataccatttctgcgagtttaattaaaatagttaaggtactgaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (76)   

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