KEGG   Enhydra lutris kenyoni (northern sea otter): 111158109
Entry
111158109         CDS       T05871                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
elk  Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03040  Spliceosome
elk05202  Transcriptional misregulation in cancer
elk05205  Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:elk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111158109
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    111158109
   05205 Proteoglycans in cancer
    111158109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:elk03041]
    111158109
   03009 Ribosome biogenesis [BR:elk03009]
    111158109
Enzymes [BR:elk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     111158109
Spliceosome [BR:elk03041]
 Complex A
  U1 snRNP components
   U1 related factors
    111158109
 Complex B
    111158109
Ribosome biogenesis [BR:elk03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    111158109
SSDB
Motif
Pfam: DEAD Helicase_C P68HR ResIII Helicase_C_2 ERCC3_RAD25_C BNIP2
Other DBs
NCBI-GeneID: 111158109
NCBI-ProteinID: XP_022375667
UniProt: A0A2Y9KNW6
Position
Unknown
AA seq 614 aa
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgtcgggttattcgagtgaccgagaccgcggccgggatcgagggtttggtgcacctcgg
tttgggggaagtagggcagggcccctgtctggaaagaaatttggaaaccctggggagaaa
ctagttaaaaagaagtggaatctcgatgagctgcccaaatttgagaagaatttttatcaa
gaacaccctgatttggctaggcgcacagcacaagaggtggagacatacagaaggagtaag
gaaattacggttagaggtcacaactgcccaaagccagttctgaatttttatgaagcaaac
ttccctgcaaatgtcatggatgtaattgcaagacagaattttactgaacccactgctatt
caggctcagggatggcccgtcgctctaagtggattggatatggttggagtagcacagact
ggatctggcaaaacattgtcttacttgctgcctgctatcgtccacattaatcatcagcca
ttcctagagagaggtgatgggcctatttgtttggtgctggcaccaactcgggaactggcc
caacaggtacagcaagtagctgctgaatactgtagagcgtgtcgattgaagtccacttgc
atctatggtggtgctcccaagggaccacagattcgtgatttggagagaggtgtggaaatt
tgtattgcaacacctggaagactgattgacttcttagagtgtgggaaaaccaatctgaga
agaactacctaccttgttcttgatgaagcagatagaatgcttgatatgggctttgaaccc
caaataaggaagattgtggatcaaataagacctgataggcaaaccctaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagattttctgaaagattacattcatata
aacattggtgcactagaactgagtgcaaaccacaacattcttcagattgtggatgtatgt
catgatgtagaaaaggatgaaaaacttattcgtctaatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgttgaaaccaaaagaagatgtgatgagcttactagaaaa
atgaggagagatgggtggcctgccatgggtatccatggtgacaagagtcaacaggagcgt
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgtgaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccgtcgggacagatactctgcgggc
aaaaggggtggatttaatacttttagagacagggaaaattatgacagaggttactctagt
ctgcttaagagagattttggggcaaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtgtctgctggtatacagaccagttttaggact
ggtaatccaacagggacttaccagaatggttacgatagcactcagcaatatggaagtaac
gttccaaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctactgcagct
gcgcctatgattggttatccaatgccaacaggatattctcaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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