KEGG   Eubacterium callanderi: ELI_2988
Entry
ELI_2988          CDS       T01336                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase-like protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
elm  Eubacterium callanderi
Pathway
elm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:elm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ELI_2988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elm03400]
    ELI_2988
Enzymes [BR:elm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     ELI_2988
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     ELI_2988
DNA repair and recombination proteins [BR:elm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     ELI_2988
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS DNA_ligase_ZBD zf-TFIIB CoV_NSP13_ZBD NFACT_N Auto_anti-p27 Ribosomal_S13 Lar_restr_allev
Other DBs
NCBI-ProteinID: ADO37957
UniProt: E3GEH1
Position
complement(2759670..2760503)
AA seq 277 aa
MLELPESYTIAGQLDEIVKGKQIEQVVAGASPHKFAFFNGEPEACRGQLLGMKVDRATSY
GGYVEIEFGDKRLLLGDGVNIRYLEAKEKKPKKHQLLLTFEDESALVFSVAMYGAIWAYT
EGENDNYYHQVAREKPSPLSGEFNWEWFEGIVAAAKKNTSAKALLATEQRIPGLGNGCLQ
DILFNARVNPRTKLEYLTEEELSRLFDSVKATLHQMTVKGGRDTEKDIFGMKGGYKSILS
KNTYKAPCPVCGGAIVKEAYLGGSVYYCPNCQPNKNC
NT seq 834 nt   +upstreamnt  +downstreamnt
atgctggaattaccagaaagctataccatagctggacaattagacgagatcgttaaagga
aaacagattgagcaggtggttgcgggagcatcaccacataaattcgccttttttaatggc
gagccggaagcctgccgtgggcagcttctggggatgaaagtagacagggccacgtcgtac
ggcggctatgttgaaattgaatttggggataagcggcttttgctgggggacggtgtcaat
atacgctatctggaggcaaaggaaaaaaagcccaaaaagcatcagctgctgctgaccttt
gaggatgagagcgctctggtcttttcggtggcgatgtacggggcaatctgggcatataca
gaaggagaaaatgacaattattaccatcaggttgccagagaaaagccatcgcccttaagc
ggagaatttaactgggaatggtttgaaggcattgtggctgcggctaagaagaataccagc
gcaaaggctcttctggcaacggaacagcggattcccggtctgggcaatggctgcctgcag
gatattctttttaacgctcgagtgaaccccagaacaaagctggaatatctgacggaagag
gaactcagccgtctgtttgactctgttaaagccactctgcatcagatgactgtaaaagga
gggcgggataccgagaaggatatttttggcatgaagggcggctataaaagcattttatcc
aaaaatacttataaagcgccctgtccggtctgcggcggtgccattgtcaaggaagcctat
ctgggcggcagcgtttattactgtccaaactgccagcccaataaaaactgttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (29)   

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