KEGG   Escherichia coli O44 H18 042 (EAEC): EC042_0460
Entry
EC042_0460        CDS       T02067                                 
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
elo  Escherichia coli O44:H18 042 (EAEC)
Pathway
elo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:elo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    EC042_0460 (xseB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elo03400]
    EC042_0460 (xseB)
Enzymes [BR:elo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     EC042_0460 (xseB)
DNA repair and recombination proteins [BR:elo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     EC042_0460 (xseB)
SSDB
Motif
Pfam: Exonuc_VII_S KxDL DUF6687
Other DBs
NCBI-ProteinID: CBG33291
UniProt: D3GUB8
Position
complement(505354..505596)
AA seq 80 aa
MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRV
QILLSDNEDASLTPFTPDNE
NT seq 243 nt   +upstreamnt  +downstreamnt
atgccgaagaaaaatgaggcgcccgccagctttgaaaaggcgctgagcgagctggaacag
attgtaacccgtctggaaagtggcgacctgccgctggaagaggcgctgaacgagttcgaa
cgcggcgtgcagctggcacgtcaggggcaggccaaattacaacaagccgaacagcgcgta
caaattctgctgtctgacaatgaagacgcctctctaaccccttttacaccggacaatgag
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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