KEGG   Escherichia coli O44 H18 042 (EAEC): EC042_3473
Entry
EC042_3473        CDS       T02067                                 
Symbol
dacB
Name
(GenBank) penicillin-binding protein 4 [includes: D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine-endopeptidase]
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
elo  Escherichia coli O44:H18 042 (EAEC)
Pathway
elo00550  Peptidoglycan biosynthesis
elo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:elo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    EC042_3473 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:elo01002]
    EC042_3473 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:elo01011]
    EC042_3473 (dacB)
Enzymes [BR:elo01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     EC042_3473 (dacB)
Peptidases and inhibitors [BR:elo01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   EC042_3473 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:elo01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   EC042_3473 (dacB)
SSDB
Motif
Pfam: Peptidase_S13 Beta-lactamase2 Transpeptidase
Other DBs
NCBI-ProteinID: CBG36299
UniProt: D3GXS2
Position
3697799..3699232
AA seq 477 aa
MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP
ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV
ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS
APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE
PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK
IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS
RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS
LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgcgattttccagatttatcatcggattgaccagctgtatagcgttcagtgttcaggcc
gcaaatgttgatgagtacattactcaactccccgctggtgccaaccttgccctgatggtg
caaaaagtcggcgcgtcggcccccgctattgattaccacagtcagcagatggcgctgccc
gccagtacccagaaagtgattactgcgctggcggcgttgattcaactcggccccgatttt
cgttttaccacgacgcttgaaaccaaaggcaatgtggaaaacggcgtacttaagggtgac
ttagtggcgcgatttggtgccgatccgacgttaaaacgtcaggatattcgcaatatggtc
gcgactttgaaaaaatctggcgtcaaccaaatcgatggcaatgtgttgatagatacctcc
attttcgccagccacgataaagcccccggctggccatggaatgacatgacacaatgcttt
agcgctccgcctgccgccgccatagttgaccgcaactgtttctccgtctcgctctacagt
gccccaaaacctggtgatatggcttttatacgcgtggcatcttattaccccgttacgatg
ttcagccaggtacgcaccctcccccgtggttctgccgaagcgcaatattgcgagctggat
gtggtgccaggcgacctgaaccgctttacgctgaccggatgcctgccacaacgttctgag
ccgctcccgttggcttttgccgtgcaggatggagccagctatgctggggcaattctgaaa
gatgagttaaaacaggcaggtatcacctggagcggaacactgctacgccagactcaggtt
aacgaacctggaacggtagttgccagtaaacagtcggccccgctgcacgatctgcttaag
attatgctgaaaaagtcggacaacatgattgccgatacggttttccgcatgataggccat
gcgcgcttcaatgtgcctggaacatggcgggccgggtcggacgccgtgcgtcagatcctg
cgccagcaagccggtgtcgatattggtaacaccattattgccgatggttcagggctttcg
cggcataacctgattgcccccgccaccatgatgcaggtgctgcaatacattgcccaacac
gacaatgaacttaactttatctctatgctaccgctggcgggctatgacggctctttgcag
taccgtgcaggtctgcatcaggcgggcgtggatggcaaagtctcagcgaaaaccggctcg
ttgcagggggtatataacctggcgggattcattaccacggcgagcgggcaacgaatggcg
tttgtacaatatctttccggctatgcagtagaaccggcggatcagcgtaatcgccgtatt
ccgttagtgcgatttgaaagccgtttgtataaagatatttatcagaataattag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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