KEGG   Erythrobacter litoralis DSM 8509: Ga0102493_112777
Entry
Ga0102493_112777  CDS       T04740                                 
Name
(GenBank) DNA topoisomerase-1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
elq  Erythrobacter litoralis DSM 8509
Brite
KEGG Orthology (KO) [BR:elq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:elq03032]
    Ga0102493_112777
   03400 DNA repair and recombination proteins [BR:elq03400]
    Ga0102493_112777
Enzymes [BR:elq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Ga0102493_112777
DNA replication proteins [BR:elq03032]
 Prokaryotic type
  DNA Topoisomerases
   Ga0102493_112777
DNA repair and recombination proteins [BR:elq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Ga0102493_112777
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Toprim_4
Other DBs
NCBI-ProteinID: AOL23782
UniProt: A0A074N3I9
Position
complement(1895472..1898060)
AA seq 862 aa
MQLVIVESPAKAKTIEKYLGKDFKVLASYGHVRDLPPKDGSVRPDEDFAMDWEVYADKRN
REQVKAIADAAKKADRLVLATDPDREGEAISWHVMDVLKKRRALPAKVERVTFNSITKQA
VTDAMKAPRELDQPLIDAYLGRRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLIVS
REREIEAFRADEYWSVIARLEYDSTQFDARLVKYKGEKLEKLSLGAEAVAMEAKAAVENG
RFTVEDVETKPLKRNPAPPFTTSTLQQEAARKLGFSASHTMRLAQNLYEAGAITYMRTDG
VQMDGSAIAACRQAIGERYESAYLPEKPRHYSTKAKNAQEAHEAIRPTDFARDRAGSGDE
AKLYSLIWKRAMASQMATAQLERTTVTLREPTGQHELRATGQVVVFPGYFAVYQEGFDDK
DDDEDGLLPLLRKGDAPARRSVEANQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTIQ
TLRDRDYVRMEKNRFFAEESGRLLTAFLERFFPTYVAYDFTAGMEDELDVVSDGREDYKA
LLAKFWADFKPKADEVMEKLPSEVTEVLDEYLSDFLFPPREDGKDPRACPLCEQEGRDGG
RLSLRGGRFGAFVACRNYPECKYTHRFAQPGADGADPAEDGLMGTHPETGEEIHRKSGRF
GPYVQMGEGKEAKRASIPRDLDDFDLEWAVKLLDLPRIIGAHPETGKEIEAAIGRYGPYL
RHDGKYAKLSSTRDVFETGMNAAVALLAEAANRKGGSRGKAEPIKVLGEHPTSGGEIKVM
PGRYGPYVTDGTTNATIPKDVKPEDVELAQAIELIDARAAKAPAKKGRKKAPAKKKAPAK
KAAAKKAPARKPSKKSAQEAAE
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgcaactcgtcatcgtcgaatcgcccgccaaggcgaaaaccatcgagaaatatctcggc
aaggacttcaaggtcctcgcttcctacggccatgtccgcgatcttccgcccaaggacggc
agcgtccgcccggacgaggatttcgcgatggactgggaggtctatgccgacaagcgcaac
cgggaacaggtcaaggcgatcgcggatgcggccaagaaggcggaccggctggtgctcgcc
accgaccccgaccgcgaaggcgaggcgatcagctggcacgtgatggacgtgctcaagaaa
cgccgtgctctgccggcgaaggtcgagcgggtgacgttcaattcgatcaccaagcaggcg
gtgaccgacgcgatgaaagcgccccgcgagctcgaccagccgctgatcgacgcctatctc
gggcgccgcgcgctcgattacctgttcggcttcaccctgtcgccggtcctgtggcgcaag
cttcccggcgcgaaaagcgcaggccgcgtgcaatcggtcgcgctgcgccttatcgtcagc
cgcgagcgcgagatcgaggccttccgcgccgacgaatactggtcggtgatagccaggctc
gaatacgattcgacccagttcgacgcgcgtctggtcaagtacaagggcgaaaagctggag
aagctgagccttggggctgaagcggtcgcgatggaagcgaaggccgcggtcgagaacggg
cgtttcacggtcgaggatgtcgagaccaagccgctcaagcgcaatccggcgccgcctttc
accacttcgaccttgcagcaggaggccgcgcgcaaactgggcttttccgcgagccacacc
atgcggctcgcgcagaacctctacgaggcgggggcgatcacctacatgcgaacggacggc
gtgcagatggacggcagcgccatcgccgcctgccgacaggcgatcggcgagcgttacgag
agcgcctacctccccgaaaagccgcgccattacagcaccaaggcgaagaatgctcaggaa
gcccacgaagcgatccggccgaccgatttcgcccgcgaccgggcgggttcgggcgacgag
gcgaagctctactcgctcatctggaagcgtgccatggcgagccagatggcgaccgcacag
ctggagcgcaccaccgtcaccctgcgcgagccgaccgggcaacacgaactgcgcgcgaca
ggccaggtggtggtcttccccggctatttcgcggtctaccaggaaggtttcgacgacaag
gacgatgacgaggacggcctgctcccgctactgcgaaagggcgatgctccggccaggcgc
tccgtggaggcgaaccagcatttcacccagccgccgccgcgcttttccgaggccagcctg
gtcaaacggctcgaggaactcggcatcgggcggccttccacctatgcttcgaccatccag
accctgcgcgaccgcgactatgtccggatggagaagaaccggttcttcgccgaggaatcg
ggccgccttctgacggcgttcctcgaacgcttcttcccgacctatgtcgcctacgatttc
acggccggcatggaggacgagctcgacgtcgtctccgacgggcgcgaggattacaaggcg
ctgctcgccaagttctgggccgacttcaagcccaaggccgacgaggtcatggaaaagctg
ccgagcgaggtgaccgaggttctcgacgaatatctctccgacttcctcttccccccgcgc
gaggacggcaaggaccctcgcgcctgcccgctgtgcgagcaggaagggcgcgacgggggc
cggctgtccctgcgcggaggacgcttcggcgcattcgtcgcctgccggaactatcccgaa
tgcaaatacacccatcgcttcgcccagccgggcgcggacggggcagacccggccgaggac
gggctcatgggcacgcatccggaaaccggcgaggaaatccaccgcaagtccgggcgtttc
ggcccctacgtccagatgggcgagggcaaggaagcgaagcgcgcctcgatccccagggat
ctcgacgatttcgatctcgaatgggcggtgaagcttctggacctgccgcgcatcatcggg
gcgcatccggagaccggcaaggagatcgaggccgcgatcgggcgctatggtccctatctt
cgccatgacggcaaatatgccaagctttcctcgacccgcgacgtgttcgaaaccggcatg
aacgccgccgtcgcgctgctggccgaggcggcgaaccgcaagggcggatcgcgtggcaag
gcagagccgatcaaggtgctgggcgaacacccgacgagcggcggcgagatcaaggtcatg
ccgggccgatatggcccttatgtcaccgacgggacgaccaatgcgaccatccccaaggat
gtgaagcccgaggatgtcgagcttgcccaggcgatcgaactgatcgatgcgcgcgcggcg
aaggcccctgcaaagaagggccgcaagaaagcgcccgcgaagaaaaaggcccctgccaag
aaggcggctgcgaagaaagcaccggcaaggaaaccttcgaagaagtccgcgcaggaagct
gcggaatag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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