KEGG   Escherichia coli O55 H7 RM12579 (EPEC): ECO55CA74_09200
Entry
ECO55CA74_09200   CDS       T02066                                 
Name
(GenBank) transcriptional regulator LsrR
  KO
K11531  lsr operon transcriptional repressor
Organism
elr  Escherichia coli O55:H7 RM12579 (EPEC)
Pathway
elr02024  Quorum sensing
elr02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:elr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ECO55CA74_09200
   02026 Biofilm formation - Escherichia coli
    ECO55CA74_09200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:elr03000]
    ECO55CA74_09200
Transcription factors [BR:elr03000]
 Prokaryotic type
  Other transcription factors
   Others
    ECO55CA74_09200
SSDB
Motif
Pfam: Sugar-bind MarR_2 HTH_Crp_2 Sigma70_r4 HTH_24 HTH_37 HTH_23 HTH_CodY MarR HTH_IclR Crp
Other DBs
NCBI-ProteinID: AEZ40428
Position
complement(1923663..1924616)
AA seq 317 aa
MTINDSVISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGII
RVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQML
AIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASS
ADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGA
VGDILGYFFDAKGDVVTDIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGY
INALVTDQDTAAAILRS
NT seq 954 nt   +upstreamnt  +downstreamnt
atgacaatcaacgattcggtaatttcagaacagggaatgtgtgaagaagaacaggtcgcg
cggatcgcgtggttttactaccacgacgggctgacccagagtgagatcagcgatcgtctc
ggcctgacccgtttgaaagtgtcgcgattactggagaaagggcatcagtccggcatcatt
cgcgtgcagattaattctcgctttgaaggctgtctggaatatgaaacacaattacgtcgt
cagttttcgctgcaacatgtccgggtgatccctgggcttgcggatgctgatgtcggcggg
cgactggggataggcgcggcgcatatgttgatgagtttacttcaaccacaacagatgctg
gcgattggttttggcgaggcaaccatgaatacgctgcaacgcttaagtggttttatttcg
tcacagcaaattcgcctggtcacgctctccggtggcgtcggttcttatatgacgggtatc
ggacagcttaatgcggcgtgcagtgtgaatattattccggctccgttgcgggcatcctcc
gctgacattgcccgtacgctaaaaaatgaaaattgtgtcaaagatgttctgttagccgcg
caagcagcggatgtggcgattgtcggcattggggccgttagtcaacaagacgacgcgacg
atcattcgctccggttatatcagccagggcgaacagttaatgattggccgaaaaggggcg
gttggcgacattttaggctacttttttgatgcaaaaggtgacgttgtcacggacattaaa
atacataacgagctgattggcttacctttaagcgcgctgaagaccatacccgtccgggtt
ggcgtggcagggggagaaaataaagccgaagcaattgccgctgcaatgaaaggcggttat
atcaacgcactggttaccgatcaggacacagcagcggcgattttacgtagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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