KEGG   Esox lucius (northern pike): 105006146
Entry
105006146         CDS       T04894                                 
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
els  Esox lucius (northern pike)
Pathway
els03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    105006146 (msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:els03400]
    105006146 (msh2)
DNA repair and recombination proteins [BR:els03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     105006146 (msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I
Other DBs
NCBI-GeneID: 105006146
NCBI-ProteinID: XP_010862818
Position
LG05:complement(13542458..13550720)
AA seq 929 aa
MAVQPKQRLSMDAAAEHGFLNYYFSMPEKPDTTFRIFDRGEYYTVHGTDALFVAKEVFKT
NGVIKTLGSGSRKLESVVLSKANFEALVRDLLLVKQYRVEVYRNHSKTKDHSWQLEYKAS
PGNLTQFEEVLFGGAEGKLAQSAGVVAVRLAVGSDGHRVLGVGYVDASLRKMGVCEFPDG
ETFCNLEALLVQLGPKECLLPQGDNTDNIRQVVQRGGVLLSDRKRSEFNSKDVTQDLNRL
LRTRRGEANACNLLPELDKQVAMSCLAAVVRYLDLLSDESNFSSFSLTTLDLSQYMRLDN
AAVQALNLFQGTLNDTSGAHSLAGLLNKCRTPQGHRLVNQWLKQPLMDKNRIEERLNLVE
CLVNDSEVRQTLQDDLLRRFPDLQRLSKKFHRRSATLQDCYRGYQAVGQIPALLLALEKH
QGSHQMLLEAVFISPLRDLQTDFIKYQEMIETTLDMNQVEHHEFLVKASFDPVLSELREK
MDSMESSMDSVLNSAARELGLDAGKTVKLECNNVLGYYLRVTCKEEKSLRNNKKFTTLDV
QKNGVRFTNSKLSSLNEDYTRSRGEYEEAQNAIVKEIISIASGYVDPLQSLSDIIAQLDA
VVSFSVASVSAPIPYVRPQLLDTDCRRLELQQARHPCLESDADTAFIPNDISLIQGERSF
YIITGPNMGGKSTFIRQVGVISLMAQIGCFVPCEKAELSMIDSVQCRVGAGDSQIKGVST
FMSEMLETAAILRSATKNSLIIIDELGRGTSTYDGFGLAWAISEHIATKIGCFCLFATHF
HELTVLATEHPTVHNLHVTALTTQHTLTMLYRVKPGVCDQSFGIHVAELACFPPAVVAMA
KQKAAELEEFQEEEPREEEGPEAKKRRSDRQEGEALIQSFLEKVKSLPAATMTDQEVKEK
LKAMKEELLAHNNAYITDLLASSTPIPST
NT seq 2790 nt   +upstreamnt  +downstreamnt
atggcggtgcaaccaaagcagagattgtccatggatgctgcagccgaacatggcttcctc
aattactacttctccatgccggagaaaccagacaccactttcaggatctttgaccgggga
gagtactacacggtacacgggactgatgcgttattcgtcgcaaaggaggtttttaagacc
aacggagtcatcaagaccctgggctcaggaagccgtaagctggaaagtgtggttctcagc
aaggccaactttgaagccctggtcagagacctgctgctagtgaaacagtacagagtggaa
gtctataggaaccacagcaagacaaaagatcacagctggcaactggagtacaaggcatct
ccaggtaatctgacccagtttgaggaggttctttttggtggggcagagggaaaattggct
caatcggcaggagttgtggctgtacgattggctgttgggtctgacggacatcgtgtgctg
ggtgtgggctacgtggatgcttcgctgaggaaaatgggagtgtgtgagtttcctgacgga
gagactttctgtaacctggaggctctgctggtacagctgggccctaaagaatgtctgcta
ccacagggagacaacactgataacatacgacaggtggtacagcgtggaggtgtgttgctg
tcggacaggaagaggtcagagttcaatagtaaagatgtgacccaggacctcaaccgactg
ctccgaaccaggagaggagaggccaatgcctgcaaccttctgcccgaactagacaaacag
gtagccatgtcgtgtctggcagctgtggttcgttatttggatttgctgtctgacgaatca
aacttcagctctttcagcctgacgacactggacctcagtcagtatatgaggctggacaac
gcagctgtacaggccctcaacctcttccagggtacccttaatgacaccagcggagcacac
tcattggctgggctgctgaataagtgccgtacccctcagggccatcgattggttaaccag
tggctcaaacagccactcatggacaagaacaggattgaggagaggctgaacctagtggag
tgtctggtgaatgacagtgaggtccgacagacccttcaggacgatctgttgcggcggttc
ccagatctccaacgtttgtccaagaagttccaccggcgctctgcaacgctgcaggactgt
taccgtggttaccaggccgtgggccagatccctgcacttttattggctctggaaaaacat
caaggaagccaccagatgctcctggaggctgtgttcatctcccctctcagagacctgcag
actgactttatcaagtaccaggaaatgattgaaactacgctcgatatgaaccaggtggag
caccatgagttcctggtgaaggcgtcgtttgatccagtgctctctgagctgagggagaag
atggactcaatggagagcagcatggacagtgtactgaatagtgcagcacgagaactgggt
ctggatgctggtaagacggtgaagttagagtgtaacaatgtgctgggttattacctgagg
gtgacctgtaaagaggagaagagtctgaggaacaacaagaagttcacaacactggatgta
cagaagaatggagtgcgcttcaccaacagtaagctgagctctctgaatgaggactacacc
aggagcagaggggagtatgaggaggcacaaaacgccatagtgaaggagatcatcagcatc
gcctccggctatgtggaccccctgcagtcgctgagtgacataattgcccagctggatgcc
gtggtcagcttctctgtggcctcggtctctgcccccatcccctatgtcaggccacagctt
ctggatacggactgcagacgcctggagctccaacaggcccggcacccctgccttgagtca
gatgcagacacagcctttatacctaatgacatatccctcatacagggggagcggagcttc
tacatcattacaggtcctaatatgggtggaaagtcaacctttatccggcaagtgggcgtt
atctctctgatggctcagattggctgctttgtgccctgtgagaaggctgagctcagcatg
attgacagcgttcagtgccgtgtgggggcaggggatagccagatcaagggcgtgtccaca
ttcatgtctgagatgctggagacggcagctattctccgttctgccacaaagaactctctg
ataataatagatgagttgggtcgaggaacgtctacgtacgatggatttggtctggcctgg
gctatcagtgaacacatcgccaccaagatcggctgcttctgtctgtttgccactcacttc
cacgagcttaccgtgttggccaccgagcaccccactgtccataacctgcatgtcaccgct
ctgactactcaacacacactcaccatgctctaccgggtcaaaccaggtgtgtgtgaccag
agttttgggatccatgtggcggagttggcttgttttccacctgctgtggttgccatggcg
aagcagaaggcggcagaactggaggagtttcaggaggaggagcctagagaggaggagggg
ccagaggccaagaagagacgtagcgacagacaggagggagaggcattgatccagtcattt
ctagagaaggtcaaatctctgccagctgccacaatgaccgaccaggaggtgaaggagaag
cttaaagccatgaaggaggaacttcttgcccataacaacgcttacatcacagatctcctg
gcaagctccaccccgatcccctcaacctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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