KEGG   Esox lucius (northern pike): 105007084
Entry
105007084         CDS       T04894                                 
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X2
  KO
K13219  splicing factor, proline- and glutamine-rich
Organism
els  Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:els00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:els01009]
    105007084 (sfpq)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:els03021]
    105007084 (sfpq)
   03041 Spliceosome [BR:els03041]
    105007084 (sfpq)
Protein phosphatases and associated proteins [BR:els01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105007084 (sfpq)
Transcription machinery [BR:els03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     105007084 (sfpq)
Spliceosome [BR:els03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    105007084 (sfpq)
SSDB
Motif
Pfam: RRM_1 NOPS RRM_7
Other DBs
NCBI-GeneID: 105007084
NCBI-ProteinID: XP_010864172
Position
LG10:complement(22464825..22486040)
AA seq 608 aa
MSRDRFRGNNRGGFQRRGGPGGPMRGGMGNLNNFRQNQHPFQRGPHPGNFGKPPNQVPQM
TPQKPVQQHLAQPGAQPIRPPPTPGPALTMKGPVQQQQAAAAAAAAASPPAAQPKIQAPP
PKIQAPPPKIQAPPPKIQSPPPKIQSPPPKIPTPPPKIQSPPPKPVLPKPEISSPPPNQM
NNRNQQRPGPSNNNNGNGHKPAQFNKKPEPQKEIQNTEKAEVEDQHPKELRATLSLLRRP
GEKTYTQRCRLFIGNLPSDISDDEFKKLFAKYGEPSEIFINKNKGFGFIRLESRALAEIA
KAELDDVPMKGRQLRVRFATHSAALSVKNLSPFVSNELLDEAFSQFGVVERAVVIVDDRG
RSTGKGIVEFASKPAARKALDRCNDGVFLLTSSPRPIVVEPLEQYDDEDGLPEKLAQKNP
NYQKEREEPPRFARPGTFEFEYSQRWKSLDDMEKQQRQQVEKNIREAREKLEGEMEDAFH
EHQANMLRQDLLRRQEELRRMEEMHSAEMQKRKEMQLRQEEERRMREEEMLRQREVEEQM
RRKREESYRMGNFMDTRDMRMGQGGAMGDNPFGSPNQKFPMGHQGMGGPNAGGAMMPNEM
GLGLIEGG
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgtctcgggacagatttagaggaaataaccgtggaggatttcaacggcgtggaggtcct
ggcggtccaatgcgcggtggaatgggtaacctgaacaattttaggcaaaaccaacacccc
tttcaaagagggcctcatcccggtaactttggaaaaccacctaatcaggtacctcagatg
acccctcagaagccagttcaacagcatcttgcccagccaggcgctcaaccgattcgacca
ccacctactcctggccctgcactaaccatgaagggcccggtacaacagcagcaggccgcg
gcggctgcagcagctgcagcatcgccgccggcagcgcagccgaaaatccaggcgccgcca
ccgaaaatccaggcgccgccaccgaaaatccaggcgccgccaccgaaaatccagtctccg
ccaccaaaaatccagtctccgccaccgaaaattccgaccccaccaccgaaaattcagtct
ccaccaccgaagcctgttcttcccaaaccggagatctcgtcaccccccccaaaccaaatg
aataataggaaccaacaaagaccaggacccagcaacaataacaatggtaatggtcataaa
cctgcccagtttaacaaaaaacccgaaccacagaaggaaattcagaatactgaaaaggcc
gaagtcgaagaccagcatcccaaggagttgagggcgactttgtccttgctgcggagacca
ggcgagaagacatacacacaacgatgccgccttttcattggaaatctgcccagcgatatc
tcggatgacgaattcaagaaactgtttgcaaaatatggagaacccagtgagattttcata
aataaaaacaaaggttttggctttatacgtctggaatcccgtgctttggcagagattgcc
aaagctgaactggatgatgtacccatgaaaggcagacagcttcgggtgcgtttcgcgaca
cactctgctgcgctatctgtgaagaacctgtcaccttttgtttccaatgagctactggat
gaggccttctcccagtttggagtggtagagcgggctgttgtcattgtagatgatcgtggg
cgctccactggcaaaggcattgttgaatttgcatcaaagcctgctgcacgaaaggccctg
gatcgctgcaacgatggagtcttcttgcttacctcgtctcctcgtccaattgttgttgag
cctcttgaacaatatgatgatgaagatggtttaccagagaaactcgctcagaagaacccc
aactatcagaaggaacgggaggagccacccaggtttgctcgtcctggcacgtttgagttt
gaatactctcagcgctggaagtcactggacgacatggagaagcagcagcgccagcaggtg
gagaagaacatccgtgaagcccgtgaaaaactggaaggggaaatggaagatgctttccat
gagcaccaggccaatatgctccgccaagatctgctgaggaggcaggaggagcttcgacgc
atggaggagatgcacagtgcagagatgcagaagaggaaagagatgcaattaaggcaggag
gaagagcgtcgcatgcgtgaggaggagatgctccgccagagggaagttgaagagcaaatg
cgtcgcaagcgtgaggagtcctacagaatgggcaacttcatggatacgagggatatgcga
atgggtcagggtggagccatgggtgacaatccttttggctcacccaaccaaaagtttccc
atgggacatcaaggcatggggggacctaatgctgggggcgccatgatgcccaatgaaatg
ggacttggattgattgaaggaggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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