KEGG   Esox lucius (northern pike): 105012594
Entry
105012594         CDS       T04894                                 
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog isoform X1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
els  Esox lucius (northern pike)
Pathway
els04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:els00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105012594 (vps28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:els04131]
    105012594 (vps28)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:els04147]
    105012594 (vps28)
Membrane trafficking [BR:els04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    105012594 (vps28)
Exosome [BR:els04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105012594 (vps28)
  Exosomal proteins of other body fluids (saliva and urine)
   105012594 (vps28)
  Exosomal proteins of colorectal cancer cells
   105012594 (vps28)
  Exosomal proteins of bladder cancer cells
   105012594 (vps28)
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 105012594
NCBI-ProteinID: XP_010871846
UniProt: A0A3P8XNA9
Position
LG10:complement(12899669..12904713)
AA seq 229 aa
MTATVTMFHGIPVTGGMGGAPANKPELYEEVKLYKNAREREKFDNMAELFAVVKTLQALE
KAYIKDCVTPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKED
RPITIKDDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETINRMSNMPPD
NEAKDKVSLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq 690 nt   +upstreamnt  +downstreamnt
atgacggcaacagtcacaatgtttcacggaatacctgttacgggaggtatgggtggagct
ccggctaataaacctgaattgtatgaggaggtgaagttgtacaagaatgcaagagaaaga
gagaagtttgacaacatggcagaactgtttgctgtagtgaagacactccaggccctggag
aaagcttacatcaaggactgtgtgacccccaatgagtacacggctgcttgctccaggctg
ctggtgcagtacaaggctgctttcaaacaggtccaagggtctgatgtgggctctattgat
gacttctgtagaaagtaccgacttgactgcccactagcaatggagagaatcaaggaggat
cgaccaatcaccatcaaggatgataagggcaacctgaatcgttgcattgcagatattgta
tcactctttatcaccgtaatggacaagctacgactggagatccgggccatggatgagatc
caaccagacctgagagagctgatggagaccattaaccgaatgagcaacatgcctccagac
aatgaggccaaagacaaagtcagcctctggttgaccactctcagcagcatgtcggcctca
gatgagttggacgactcccaggttcgccagatgctgtttgacctggagtcggcatacaac
gccttcaatcgcttcttacactcctcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

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