KEGG   Esox lucius (northern pike): 105012751
Entry
105012751         CDS       T04894                                 
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
  KO
K15732  RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
Organism
els  Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:els00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:els01009]
    105012751 (ctdp1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:els03021]
    105012751 (ctdp1)
Enzymes [BR:els01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     105012751 (ctdp1)
Protein phosphatases and associated proteins [BR:els01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   105012751 (ctdp1)
Transcription machinery [BR:els03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     105012751 (ctdp1)
SSDB
Motif
Pfam: FCP1_C NIF BRCT PTCB-BRCT Biotin_lipoyl RTT107_BRCT_5 Nairovirus_Gn LIG3_BRCT
Other DBs
NCBI-GeneID: 105012751
NCBI-ProteinID: XP_010872109
Position
LG10:16070003..16148629
AA seq 1032 aa
MEEPADSGGGSAALGPTAQVAEIRCPITARPMRLLEWKVKPGSLVNVDSVLALCAPISEK
ESASQPPEQPNRQPDKKLKSDRAGVVKELCCQLGQVISPGGVIVRVEECSHPVVMKGLCA
ECGQDLTQMQSNNGRQQAHISTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNKKLVL
MVDLDQTLIHTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKLYELHVF
TFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDRE
DVWKFAPNLITVKKYIYFQGTGDINAPPGSREAQQGRKAGVHASRPAQSSEPAVTPGTTE
SVVGASGVEEQSNGLRKPRGKDRNEGGKEESTALSTTPVAPANERTQPDGGEAREERRGQ
GEGAEAQVSDRTNVREEVRIEAEDGSRTVVSGEEAPPPDGGNSSGTPPDLHEPNSNLDFD
LSSDSDSESITGKLPSSDSEVDEGSSQTRKCKQERVEPAGVEEISLRDERNDECKEKSTG
ENITEVGEETSGLGVVLPADPELENGCSERKEVETESQNSEQSGVTMGEESLDQSMEEEE
EEEEEEEVDVDKDDHLIYLEEVLERIHREYYGRYEAFLRKERPEMPDIRKIVPELKARTL
EGITIVFSGLYPTNYPMERTRESYHAKALGAKIGKSLLLRAKDPDRTTHLIAARTGTEKV
RQAQGFKHLHVVNPEWLWGCLERWDRVEEALYPLKEDYIKTQRSNSPATFPDLQSSFQSP
LYPHAPHHHNPLQAAPESRTYDPVTGKLIRRGPQASKPPSYIQASMSSAHADQASLRGGQ
KAPQGENAGPSRQDEEQPGPSCRRRERQPSMSETNPLYTLCKEDLDSMDKEVDDILDEES
DEEGESRVKKTREMEEEEEMDEEEEGQRLQGSEQSNEEGTHLRHQPPPGLGSVKGKMEKT
QVPSSDQGEKMTGSVPRGQKRKLAEAKVEEAEEEEGESADESTKDSNEEEEGSSSEADEM
AAALDAELNDFM
NT seq 3099 nt   +upstreamnt  +downstreamnt
atggaggagcctgcagactccggcggtggcagtgcagcactgggccctacagcgcaagtg
gcggagatccgctgcccaataacagcgcgtcctatgcggctgctggaatggaaagtcaaa
cccgggtccctcgtaaatgtagactcggtgttagcgctatgtgctcccatctctgagaaa
gagtccgcgtctcagccgcctgaacagcccaacaggcagcccgataaaaagctgaaatct
gatcgagctggagtggtgaaggagctatgttgtcaacttggacaagtcatatcgccaggt
ggtgtgattgtcagagtcgaagaatgcagccatcctgttgtgatgaaggggctgtgcgct
gaatgcggccaggacctcacacaaatgcagagtaataatgggaggcagcaggctcacatc
tccacggcaactgtttccatggtgcacagtgtccctgagttgatggtcagctctgagcaa
gcagagcagctgggcagagaagaccagcagagactccacaggaataagaagctggttctc
atggttgatctggaccagaccctgatccacaccactgagcagcactgccagcgcatgtcc
aacaagggaatctttcatttccagctgggtcggggggagcccatgttacacacgcgcctg
cgtccacactgcaaagaatttcttgagaaaatcgccaagctctatgagctgcatgtgttc
accttcggaagccgcctctacgcacacaccattgctggtttcctggaccctgagaaaaag
ctgttctctcaccggatcctgtccagagacgaatgtatcgaccccttctccaagactggg
aacttaaggaatttgttcccgtgtggtgactccatggtgtgcattatagatgaccgggag
gatgtgtggaagtttgctcccaacctgatcactgtgaagaaatacatctacttccagggc
acgggagacatcaacgcaccgcctgggtccagagaggctcagcagggaaggaaagctggt
gtccatgccagccgaccagcgcagtcctccgaaccagcagtgacgcctgggacaactgag
tcagtggtgggagcgtccggggtggaggagcagagcaacggtctcaggaaaccacggggg
aaagaccgcaacgaaggaggaaaggaggagtcaacggccttgtcaaccactccggtagcc
ccggccaatgaacggactcagccagatgggggcgaggccagggaggaaaggcggggccag
ggggagggggctgaggcacaggtgagcgacaggacgaatgtgagagaggaggttcgaata
gaggcggaggatgggagcaggacagtagtctcaggggaggaagctccccctccggatggg
gggaactcatccggcactcctccagacctccatgagcccaacagcaacctagactttgat
ctgtccagcgacagcgactctgaatctattacgggtaaactcccctcatcggacagcgag
gtggacgaggggtccagccagaccaggaagtgcaaacaggaacgggtggagccggcagga
gtagaggagatatcgttgcgcgatgaaagaaatgatgagtgtaaagagaagagcactggg
gagaacatcaccgaggtgggcgaagagacatcaggcctaggtgttgtcctccccgctgac
ccagagctggagaacgggtgctccgagcggaaggaggtggaaacggagtcccagaacagc
gagcagtcaggagttactatgggggaagagtctttggaccaaagcatggaggaggaggag
gaggaggaggaggaggaggaggtggatgtggacaaggatgaccacctcatctacctggag
gaggtgttagagcgcatccacagagaatactacggccgttatgaagctttcctcaggaag
gaacgcccagagatgcctgacatcaggaagatcgtcccagagctgaaggcccggacactg
gagggcatcaccatcgtcttctctggcctgtaccccaccaactaccccatggagagaacc
agggagtcctaccatgccaaggccctgggagccaaaataggcaagtcactgctgctcaga
gctaaagacccagaccggaccacacacctcatcgctgctcggacaggaacagagaaggtc
cgccaagcccagggctttaagcacctccatgtggtgaaccctgaatggctttggggatgt
ctggagcgctgggacagggtggaagaagcactgtatccattgaaagaggactacataaag
actcaacggagcaacagccctgccacattccctgacctccaaagctcctttcagagcccc
ctgtacccccacgctcctcaccaccacaacccccttcaagccgcccccgagtcgcggacc
tacgaccctgtcacggggaagctgattcgccgcgggcctcaggcctccaaaccaccatct
tacatccaggcctccatgtcttctgcacacgctgaccaggcctcgctcaggggcggtcag
aaggcaccgcagggggagaatgcaggaccctcccgtcaagacgaggaacaacccggtcct
tcctgccggcgccgggaacgccagcctagcatgtcagagaccaaccccctttacaccctc
tgtaaagaagacctggacagcatggataaagaagtggacgacatcctagatgaggagagc
gatgaagagggagaaagccgggtaaaaaagacaagggaaatggaagaggaagaggagatg
gatgaggaagaggaagggcagcggctgcagggtagtgaacaaagcaatgaggaaggaacg
catctgcgccaccaaccgccaccaggtctgggcagtgtcaaggggaaaatggagaagaca
caggtcccatctagtgaccagggtgagaagatgacgggaagtgtgccaaggggacagaaa
cgcaagcttgccgaggccaaggtggaggaagcagaggaagaagagggggagtcggcggat
gagtccaccaaggactccaacgaggaagaggagggaagcagctctgaagctgacgagatg
gccgctgccctggacgctgagctgaacgatttcatgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (60)   

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