KEGG   Esox lucius (northern pike): 105017026
Entry
105017026         CDS       T04894                                 
Symbol
rad18
Name
(RefSeq) E3 ubiquitin-protein ligase RAD18 isoform X2
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
els  Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:els00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:els04121]
    105017026 (rad18)
   03400 DNA repair and recombination proteins [BR:els03400]
    105017026 (rad18)
Enzymes [BR:els01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105017026 (rad18)
Ubiquitin system [BR:els04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105017026 (rad18)
DNA repair and recombination proteins [BR:els03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    105017026 (rad18)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 SAP zf-RING_6 zf-RING_2 zf-RING_5 zf-C3HC4_4 zf-C3HC4_3 zf-RING_10 FliD_C U-box zf-rbx1 DUF1133 zf-Nse
Other DBs
NCBI-GeneID: 105017026
NCBI-ProteinID: XP_010879620
Position
LG17:19461955..19514651
AA seq 514 aa
MANFNIAELQPNLTCLKNVDTLLRCPICFEFLNIPMMTKCSHNFCSLCIRKFLSYKLLCP
VCNSITTEQDLRNNRILDDLITTFQIARQQMSKAHFDTPPISPKTPSSTIKCKTPGMYRG
PKKEGSILNHFFQKAPTTSSSAVTTAAVPTPRGKRQSGALECSQTMKESPRHTLNVNADS
SLQVSVKEEPMDLEIPAQSVKMMNISTGLVSLANSQSTSQDIKPLIKVECPVCSVGISEQ
FINKHLDICLTRGEKHDSLRSSLGAKRKPMGKLVYTLLSMQELKRRLKECHLSVQGNRDQ
LVRRHQDFVHMYNAQCDALEPKPAESIAKEVEANEKARNQLKGKTKSAMVFSKNQSVAEI
GEIHSTYIKQHSHEFSQLIAEVRGRRETTKKMKQEMGVSGGEEGQGVCSSSTDKAAVQEQ
SKAIPNEPGAYCLLMSTPVKEPSEEQHQPSLEDVIARSPSPCLSDRSISSSISDVFVDRC
FEVLEKASRGKRASCSREEDSGQPLVLGKRARKT
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggcaaattttaatatagcagaattgcaaccaaatctgacttgccttaaaaatgtagat
acccttctccgatgtcccatttgtttcgagttcctgaatatcccaatgatgacaaaatgc
tctcacaacttctgctctttgtgcattagaaaattcctctcctacaagttgctatgtccg
gtatgcaattcaattacaacagaacaggaccttagaaacaaccggatactggatgacctg
atcacaacttttcaaattgcaagacagcagatgtcgaaagctcattttgacacgcctcca
atatcgcccaagactccatcctcaactatcaagtgtaaaacacctggaatgtacaggggc
cccaagaaggagggctccatccttaaccattttttccagaaggcccccacgacctcctca
agcgctgttactacggcggctgtgcctactccccgtggaaagagacagtcgggcgcgctt
gaatgtagccaaactatgaaggagagccctcgtcatacgctcaatgtgaatgcagactcc
agtcttcaggtctctgtgaaggaggagcccatggatttggagataccagctcagtctgtg
aagatgatgaacatctctactggtctggtgtctcttgctaactcacaatccacatcacag
gatatcaagcctctgattaaagtcgagtgtcctgtgtgttccgtggggatctctgaacag
ttcatcaacaaacacctggacatctgtctgacccgaggggagaagcatgacagccttagg
agctccctaggtgctaagcggaaaccaatggggaagctagtgtacacactgctgtccatg
caggagctgaagaggagactgaaagagtgccacctctctgtccagggcaacagagatcag
ctggtcaggaggcaccaggactttgtacacatgtacaatgcccagtgtgacgccctagaa
ccaaaaccagctgaaagtattgctaaagaagtggaggccaatgagaaggccaggaaccaa
cttaaagggaaaaccaaaagtgccatggtgttctccaagaatcaaagtgtggcggaaatt
ggtgagatccattcgacctacattaagcaacacagccatgagttctcccaactcattgca
gaggtccggggtcgccgggagacaaccaagaagatgaaacaggaaatgggggtttccgga
ggagaggaaggccagggagtgtgctcaagctccacagacaaagcagcagtacaggaacag
agtaaagccattccaaatgaaccaggagcgtactgcctattgatgagcacaccagttaag
gagccctctgaggagcagcatcagccttctcttgaagatgtcatcgccaggtcacccagc
ccctgtctcagtgacaggtcaatcagcagctccatctctgatgtcttcgttgacagatgc
tttgaagttttggagaaagcctcgagagggaagcgggcttcctgctccagggaggaagat
tctggtcaacctcttgtcctgggtaaacgagcccggaaaacgtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (55)   

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