KEGG   Esox lucius (northern pike): 105018683
Entry
105018683         CDS       T04894                                 
Symbol
sin3a
Name
(RefSeq) paired amphipathic helix protein Sin3a
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
els  Esox lucius (northern pike)
Pathway
els04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:els00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    105018683 (sin3a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:els03036]
    105018683 (sin3a)
Chromosome and associated proteins [BR:els03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     105018683 (sin3a)
    REST complex
     105018683 (sin3a)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105018683 (sin3a)
SSDB
Motif
Pfam: Sin3a_C PAH Sin3_corepress
Other DBs
NCBI-GeneID: 105018683
NCBI-ProteinID: XP_010882605
Position
LG19:complement(39539424..39562853)
AA seq 1272 aa
MKRRLEEQEPVFASQQRRLPGNTETFQHRALAPSSAVYEAVADSMQPTAGSIQYSVPQGY
QVPSVPQSSGVHGHAPSPAVHGGSHHQSPAVQSHGPTVMQGHAHPPAPPATAQGQQQFQR
LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVATNDLVNVTTPGQIHHITPHGISVSQIPLTGPPTPHQPHVAAPTTS
APLPPMQPTPAKISKPLQSLALTPSSQPNPSIPAYASPRSPPLQPHTPVSGAPNIPPLQN
NQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYIPALTEQEV
YAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRNDHGGTAKKPQLNNKQR
PNQNGCQIRRNSVTGVTPPVKKKPKLLNLKDSSLSEANKHGVGTESLFFEKVRKALRSAE
AYDNFLRCLVIFNQEVITRAELVQLVLPFLGKFPELFNWFKNFLGYREMSHIENYPKERA
TEGIAMEIDYASCKRLGSSYRALPKSYTQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFV
SSKKTQYEEHIYRCEDERFELDVVLETNLATIRMLETVQRKLSRMSAEEQAKFRLDNTLG
GSSEVIHRKAIQRIYGDKAADIMDGLKKNPAVSVPIVLKRLKVKEEEWREAQRGFNKIWR
EQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIESIYDERQEQAPDENGTPSSGPHLT
LTYEDSQILEDAAALIIHHVKRQAGIQKEDKYKIKQIIHHLIPDLLFAQRGELSDVEEEE
EMELDEAGAKKHNGVTQGGSPTKSSKLLFSNTGAQKLRSCDEAYHLFYVNNNWYIFLRLH
QTLCSRLLRLYGQAERQIEEDVRERNWEREVLGLKRGKNENTAIQLRLREPMDIEVEDYY
SAFLEMVRNLLDGNMEPAQYEDSLREMFTIHAYTAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSESTNGATGGPLPTQTARASTEACYQRKAEHIMSDENCFKVVFLKNRGHVQLTV
ELLDTEEENSDEPMEAERWSDYVGRYLNSDSTSPELREHLAQKPVFLPRNLRRIRKYQRG
REHLEKEASEGGKRSVENAENLKMECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQSHQK
VSTRLHKRFQAWVDNWVKEHVTRDMAAETSKWLMGEGRDGLLPCTTTREPEILHFMNINK
YRVKYGPPFKTA
NT seq 3819 nt   +upstreamnt  +downstreamnt
atgaaacggcgattggaggaacaggaaccagtctttgcgtcccaacagcggcgccttcct
ggcaacactgagactttccagcaccgtgccctggccccatcgtcggctgtatacgaggcc
gtggccgacagcatgcagcccaccgcaggcagcatccagtattctgtccctcagggatac
caggtgccctcggtgccccagagctcgggtgttcacgggcatgcccctagcccggccgtg
catggtggctcccaccaccaaagtccagccgtccaatcccacgggccaactgtgatgcag
ggccatgctcacccccccgcaccccctgccacagcccagggccagcagcagtttcagagg
ctcaaggtggaagatgctttgtcgtatctggatcaagtgaaactgcagtttggcaaccag
ccacaagtgtacaatgacttcctggacatcatgaaggagttcaagtctcaaagcattgac
actccgggggtgataagcagggtgtcccagctctttaagggccaccccgacctcattatg
ggcttcaacaccttcctgccaccgggctacaagatcgaggttgcaaccaacgacctggtc
aatgtgaccactcctggtcagatccaccacatcacacctcacggcatatcagtctcccaa
atccccctgactggaccccccactccgcaccaaccccatgtggccgctcccaccacatct
gccccacttcctcccatgcagccaacccctgctaagattagcaagccgctgcagtctcta
gcccttacaccaagcagccagcccaatccatctataccagcctatgcctccccccgctcc
ccacccctgcagccccacaccccagtcagtggcgcgcccaacatccctcctctgcagaac
aatcagcctgtggagttcaatcacgctatcaactacgtcaacaagatcaagaaccggttc
cagggccagcctgacatctacaaagccttccttgagatcttgcacacgtatcagaaggag
cagcgaaatgctaaggaggcaggtggaaactacatccctgccctaacagagcaggaggtc
tacgcccaggttgcccggctcttcaagaaccaggaggacctactttcagagtttggccag
ttccttcctgacgccaacagctcggtgcttttaagcaagactacagcggagaaggcggag
tctgtgcggaacgaccacggtggcacggcgaagaagccgcagctcaacaacaaacagaga
cccaatcagaacggctgccaaatccgcaggaactctgtgacgggggtaacaccccctgtc
aagaagaagcccaagttacttaatttgaaagactcgtctctgtcagaggccaacaaacat
ggagttggcacagaatctctgttctttgagaaggtgcggaaggccttgcggagcgcagag
gcctatgacaacttcttgcgttgtctggtcatcttcaatcaggaagtcatcaccagggct
gagctggtgcaactggtgctgccctttctgggaaaattcccagagctgttcaattggttc
aagaacttcctaggataccgggagatgtcccacattgagaactatcccaaggagcgtgcc
acagagggcatcgccatggagattgactatgcttcctgtaagaggcttggctccagctac
agagccctgccgaagagctacacacagcctaaatgcaccgggagaacgccactgtgcaaa
gaagtcctcaatgatacctgggtatcgtttccttcctggtcagaagactcgacctttgtg
agctccaagaagacccaatatgaggagcacatttacagatgtgaagatgaacgcttcgag
ctggacgtggtgctggagacaaacctggccaccatccgcatgctggagactgtacaaagg
aaactgtcccgcatgtcagccgaggagcaggccaagttccgcctggacaacacactggga
ggctcctccgaggtcatccaccgcaaggccatccagaggatatatggcgacaaggccgct
gacatcatggatgggctcaagaagaaccccgctgtgtctgttcccattgtgctaaagagg
ttaaaggtcaaggaggaggagtggcgggaagcccagagaggcttcaacaagatctggagg
gagcagaatgagaagtactacctaaagtctctcgaccaccaaggcatcaacttcaagcag
aacgacaccaaggtgctacgatccaagacgctgctcaatgagattgagagcatctacgat
gagcgacaagagcaagcaccagatgagaatggcacgccttccagtggcccccatttgact
ctgacatacgaagacagccagatcttggaagacgcagccgccctcatcatccaccatgtt
aagcgccaggcaggcatccagaaggaggacaagtacaagatcaaacaaatcatccaccac
ttaatccctgacctgctgtttgcccagcggggcgagctctcagacgtggaggaagaagag
gagatggagctggacgaggccggagccaagaagcacaacggagtcacgcaaggtggcagc
ccaaccaagtcctccaagctcctctttagcaacactggtgcccagaagctaaggagttgt
gatgaggcctaccacctcttctacgtcaacaataactggtacatcttcctgcggctgcat
cagaccttgtgctcgcggctgttacgtctttacgggcaggcagagcggcagattgaggag
gacgtccgcgagcgcaactgggagagagaagtgctgggcctgaagcggggcaagaacgaa
aacactgccattcagctgagactgagggagcccatggatatcgaggtggaggactactac
tctgccttcctggaaatggtgcggaaccttctagatggtaacatggaaccagctcagtat
gaggattccctccgagagatgttcaccatccatgcctacactgccttcaccatggacaag
ctcatccagagcattgtcaggcagctccagcacatagtaagcgatgagatctgcgtgcag
gtgacagacttatacctatcggagagcaccaacggagccactggaggtccccttcccacc
cagacggccagggcttccacagaagcatgctaccagcgcaaggcagagcacatcatgtct
gacgagaactgcttcaaggttgtgttcctgaagaacagaggccatgttcagctcactgtg
gagcttctggacacggaggaggagaactctgatgagcccatggaggcagagcggtggtca
gattacgtgggtcgctacctgaattctgactcaacctctccagagttacgggaacacctt
gctcagaagcctgtctttctccccaggaatctcagacggatacggaaataccaacgtggt
agggaacacctggagaaggaggccagcgagggagggaaaaggtctgtggagaatgcagag
aacctaaagatggaatgcatgttcaagctcaactcctacaagatggtctatgtcttcaag
tctgaggactacatgtacagacgcactgccttgctgcgtgctcaccagtcacaccagaag
gtgagcacacggttgcacaaacgcttccaggcctgggtggacaactgggtgaaggagcat
gtcacccgggacatggccgccgaaaccagcaagtggttgatgggtgaagggcgtgatggc
ctgttgccgtgcaccacaactcgcgagccagagatcctccacttcatgaacattaacaag
taccgtgtcaaatatggtccaccattcaaaactgcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (51)   

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