KEGG   Esox lucius (northern pike): 105022316
Entry
105022316         CDS       T04894                                 
Symbol
pan2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
els  Esox lucius (northern pike)
Pathway
els03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105022316 (pan2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:els03019]
    105022316 (pan2)
Enzymes [BR:els01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     105022316 (pan2)
Messenger RNA biogenesis [BR:els03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105022316 (pan2)
  mRNA degradation factors
   3'-5' decay
    Pan complex
     105022316 (pan2)
SSDB
Motif
Pfam: PAN2_N UCH_1 RNase_T UCH WD40_like
Other DBs
NCBI-GeneID: 105022316
NCBI-ProteinID: XP_010888887
UniProt: A0A3P8ZAC7
Position
LG12:11692387..11706036
AA seq 1208 aa
MMNFDGMDSGIGEYAPTLHGSLEPGMETSMDPRLNPGLLQGVELDSDGLPVAVPESVHMM
EGMFSELHSVHAEVGVPVTATHFDLQEELLWMGNHRGHAMSFFGPTMGRYSSFQAHSTDD
IRQIQSMETGVLFLSKSNLKCQTRGGLVMFDYPMEEGADMHSLLMTDNNTMLMGGLQNYV
LEFDLNTVQQTQKFTVEAPGVAIMRQSNRFLFCGNTSGKVSLCDLRTFKLEHEFDAFSGS
LSDFDVHGNLLAACGFSSRGLNGLACDRFLMVFDLRMMRAVTPLQVHVDPLFLRFIPTYT
SRLAIISQTGQCQFCEPTGLANLADIFHVNTVGQLLMSFDVSSSKQALAFGDSGGGLHLW
SDAPEVSYNGYSRETEFALPCLVDSLPQLDWSHDLLPLSLIPMPLTNSEPLLSDWVTTQA
TPSPRRAPPVDPEILRTMKTVGFIGYAPNPRTRPRNQIPYKIKEVELDYDNYNQGVPESP
SGRDEEPHLYMVPKKYRKVTIKYSKLGLEDFDFKHYNRTLFAGLEPHIPNAYCNCMIQVL
YFLEPIRCLVQNHLCQKEFCLACELGFLFHMLDLSRGDPCQASNFLRAFRTIPEASALGL
ILADSDEQTGKARLGRLIQSWNRFILTQLHQETQEQEGPQAYRGASSAQGSSGESVIGRQ
FGCEVENSSLCRCGKETVRSSLTLLFTMHYPEQSSLDKTIKEYDFAEILRKSICLEQSTQ
AWCENCEKYQPTVQTRNIRCLPDVLVINCEVNSVKEAEFWKAQAEYAFIKAKKKEEMEPP
KSKEPPPPPPQPTEWCLEEELVNTEGLTFDTRVEDLRHVWIPLTLKMSISKSQGLEVTSW
PEGEELSSTEEAEGASLYDLVVTVPHILDARTGGNLVAHIKVGETYHVRKEGVTHQQWYL
FNDFLIEPIDKAEAAQFDVNWKVPAILYYAKRNYHNKYDLRIKNPIEASVLLTEASLARK
QRKSHATFIPLMVSEMPQAGDLVGLDAEFVTLNQEEAELRSDGTKSTIKPSQMSVARITC
VRGQGPNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFL
IDTGVRFVGHGLQKDFRVINLLVLKDQVIDTVYLFHMPRKRMISLRFLAWYFLDLNIQGE
THDSIEDARTALALYRKYLELCCGGGNDEVRKVLKGLYEKGRKLDWKVPDCDIGDGQGSP
KSTKLAMH
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgatgaactttgacggtatggactcggggataggtgaatacgcacccactctgcatggg
agtctagagccgggtatggagacctcaatggacccacggcttaatccaggcttgttgcaa
ggtgtggagcttgattcagatggccttcccgtggccgttcccgagtctgtgcacatgatg
gaaggcatgttctcagagctccacagtgtgcatgcagaggttggcgttcctgttacagca
acccactttgatttgcaggaggaactgctttggatgggaaaccacagggggcatgcgatg
tccttctttggtcccacaatgggccgctactcttcattccaggcgcactcaactgatgac
attcgtcagattcagagcatggagacgggtgttctgtttctctccaagagtaatctcaag
tgccaaacgcgtggaggccttgtcatgttcgactacccaatggaggagggagctgacatg
catagtctgcttatgaccgacaacaacacaatgctcatgggtggactacagaactatgtg
cttgaatttgaccttaatactgtgcagcagacacaaaagttcactgtcgaagctccaggg
gtagctataatgcgacagtctaaccgtttcctgttctgtgggaacacatctgggaaggtg
tcgctttgtgacttgcgcactttcaagcttgaacatgagtttgatgccttctccggtagc
ctgtcggacttcgatgtccacggcaacctccttgcggcctgtggcttctccagtcgaggg
ttgaacggactggcatgtgatcgcttcctcatggtgttcgacttgcgcatgatgcgcgcc
gtaacacctcttcaggtgcatgtggacccccttttcttgcgcttcattcctacctacacg
tcacgtttggccatcatctcacagacaggacagtgtcagttctgtgagcccactgggcta
gccaatctggcagacatcttccatgtcaacactgtgggccagttgctcatgagcttcgac
gtgtcctccagcaagcaggctttggcatttggcgactctgggggaggtttgcacctttgg
tcagatgccccagaagtctcttataatggttattcccgggagacagagtttgctctgccc
tgtctggtggactccctgccccaactagactggagccatgacctgttgcctttgtccctc
attcccatgcccttgactaactcagagccactactatcagactgggtcaccacacaggcc
actcccagccctagacgcgcacccccagtggacccagagatactgcgcacgatgaagacc
gtggggttcattggttacgcccctaatccacgcactcgaccccggaaccagattccttac
aaaatcaaggaagttgaactggactacgacaactacaaccagggtgttcctgagtcccct
agtggccgagatgaggaaccacatctctacatggtgcccaagaaatacagaaaggtcaca
atcaaatactcaaaacttgggctggaggactttgactttaaacattacaacagaacactc
tttgctggcctggaacctcacattcccaatgcttactgcaactgcatgatccaggtgttg
tattttctggaaccaatccgctgcctggtccagaaccacctttgtcagaaggagttctgt
ctggcatgtgagctggggttcctctttcacatgctggacctgtcacgaggagatccctgt
caggccagtaatttcctcagagctttccgaactatcccggaggcgtctgccctgggcctg
atcctggctgactctgacgaacagactgggaaggccagactgggccgtctcatccagagc
tggaaccgcttcattctcacccagctccaccaggagacccaggagcaagaggggcctcag
gcctacagaggagccagcagtgctcagggctcctcgggtgagtctgtcatcggaaggcag
tttggctgtgaggttgagaacagcagcctgtgtcgctgtggaaaggagaccgtgcgttca
tctctcaccttgctctttaccatgcattaccctgagcagagctcacttgataagacgata
aaggaatatgactttgctgagatcctgaggaagagcatatgcctggagcagagcacacag
gcttggtgtgagaactgtgagaagtaccagcccactgtgcagactcggaacatccgctgc
cttcctgatgtactggtcattaactgtgaggtcaacagtgtcaaagaggcagagttctgg
aaagcccaggcagagtatgctttcatcaaggccaagaagaaagaggaaatggaaccacct
aagtccaaagaacctccacctccaccaccacaaccaactgagtggtgcttagaggaggag
ctggtgaatactgagggcctgacctttgacaccagggtggaggacctgcgtcacgtctgg
atccctctcactctgaagatgtccattagcaaaagccagggcctggaggtgaccagctgg
cctgagggagaggagctgagctcaactgaggaggccgaaggagcgtccctttatgacttg
gtggttaccgtgcctcatatactggatgctcgcactgggggcaacctggtagcacacatc
aaagtgggagagacttaccatgtcagaaaggagggggtgacacaccagcaatggtatctt
ttcaatgacttcctgattgagccaattgacaaggctgaagcagcacagtttgatgtaaac
tggaaggttcctgccatcctgtattacgccaagagaaactaccacaacaaatatgaccta
cgcattaaaaaccctattgaggccagtgtgctgctgacggaggcgtcactggcacggaag
cagaggaagagccacgctacattcatccccctcatggtcagtgagatgccccaggctgga
gacctcgtgggactggacgctgagttcgtcaccctcaaccaggaggaggcggagctacgc
agcgacggcaccaagtcgaccattaagcccagtcagatgtctgtggcgcggatcacatgc
gtgcgcggtcagggtcccaacgagggagttccgttcattgatgattacatctccactcag
gagcaggtggtggactatctgacccagtactcaggcattaaaccaggggacctggatgct
aagatttcctccaagcacttgaccactctgaagtcaacatacttgaaactgcgttttctc
attgacactggagttcgctttgttggccatggtttacaaaaagacttccgggttataaat
ttgctggttctaaaggatcaggttatcgacacagtctacctgtttcatatgcctcgtaag
aggatgatctctctgcgttttctcgcctggtattttctggaccttaacatccagggagag
acccatgacagtattgaggacgcccgcacggcccttgctctgtacaggaagtacctggaa
ctttgctgtggaggagggaatgatgaggttcgcaaagttctgaagggactctacgagaaa
ggtcgcaagctagactggaaagtcccagactgcgacataggagatggtcaaggtagccca
aaaagtacaaaactggcaatgcattaa

DBGET integrated database retrieval system