KEGG   Esox lucius (northern pike): 105025584
Entry
105025584         CDS       T04894                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B isoform X1
  KO
K10609  cullin 4
Organism
els  Esox lucius (northern pike)
Pathway
els03420  Nucleotide excision repair
els04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105025584 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    105025584 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:els04121]
    105025584 (cul4b)
   03400 DNA repair and recombination proteins [BR:els03400]
    105025584 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:els04147]
    105025584 (cul4b)
Ubiquitin system [BR:els04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     105025584 (cul4b)
DNA repair and recombination proteins [BR:els03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      105025584 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      105025584 (cul4b)
Exosome [BR:els04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105025584 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 105025584
NCBI-ProteinID: XP_010894682
Position
LG04:26687136..26701440
AA seq 858 aa
MDSIVVEGLPSPNPPPPTQEARTVASDVNNDSSITSSKKRKINSSEKEDIDSISSSPKTT
NSSSCSSTSHHIQKKLRFEDSVDFIGLDVKMAEESSSSASCSSNKTKTMFLTGGVVHHAN
GLTKTAGSATFSNSKPGAAKKLVIKNFKEKPKLPENYTHETWQKLKEAVEAIQNSTSIKY
NLEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQINQFREDALDSTLFLKKIDKCWQD
HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILLLIE
KERSGETIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLH
HVHKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLNHLLDENRIQDLSL
LYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDTCFM
KNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMIIFR
FIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELS
KDIMVQFKQYIQCQNIPGNIELTVNILTMGYWPTYIPMEVHLPAEMVRLQEIFKTFYLGK
HSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLATGIED
GELRRTLQSLACGKARVIHKVPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQ
ASTTERVYQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLID
RDYMERDKENPNQYNYVA
NT seq 2577 nt   +upstreamnt  +downstreamnt
atggactcgattgtagtagaaggtttaccttcccctaatcccccaccgccaacccaagag
gctagaactgtagcttcagatgtaaataacgatagcagcatcacgtcttcgaagaagagg
aaaataaacagttcagagaaggaagacattgattcaatctcttcatctcctaaaacaaca
aattcatcttcttgctcctccacttcgcaccacatccagaagaagttgaggttcgaagat
tcagtagatttcattgggctcgatgtgaaaatggccgaggagtcgtcctcgtctgcatct
tgttcctctaacaagacaaaaacaatgtttttgactgggggtgttgtgcatcatgcaaac
ggactgaccaaaactgcaggctctgctaccttctccaatagcaaacctggagctgcaaag
aaactagtcatcaagaacttcaaagaaaaacccaaattgccagagaactacacacatgaa
acctggcaaaaactgaaggaggcagttgaggcaattcagaacagcacttcaatcaagtac
aaccttgaggaactttaccaggctgttgagaacctctgctcccataagatatctgccaag
ctttacaaacagctgcgagtggtgtgtgaagaccacattaaggcacaaatcaatcaattc
agagaggatgcactggacagtacgctcttcctgaagaaaatagataaatgctggcaggat
cactgcagacaaatgatcatgattagaagtatatttttgttcttggaccgcacatacgtt
ttacaaaattccatgctgccatcaatctgggacatgggcttggagttgtttcggttttac
attatcagtgatctgaaggtacagagtaagaccattgacggcatcctgctgctcatcgaa
aaggagcgcagcggcgagaccatcgaccgcagtttgctccgcagcctactgagcatgctc
tctgacctgcagatttaccaggactcctttgagcagcgctttctggaagagactaatcgt
ctgtatgccgctgagggacagagattgatgcaagagagagaggtcccagagtacctccat
cacgttcacaaacgcttggaggaggaagctgaccgagtcatcacgtatttagaccaaagt
acacaaaaacctcttatagccacggtggaaaaacaactactgggcgaacatctcactgca
accctgcagaaaggcttgaatcacctgctagacgagaaccgaatacaggacttgtctctc
ctctatcagctattcagtcgagtcagagggggcgtgcaagtccttctgcagcactggatt
gagtatatcaaggcctttggaagcacgatcgtcatcaatccagaaaaggataagaccatg
gtgcaggagctgctggacttcaaggacaaagtggaccacatcatcgacacatgcttcatg
aagaacgagaagtttgtcaatgccatgaaggaggcatttgagaccttcatcaacaagagg
ccaaacaaaccggccgagctcatagcaaaacatgtggattcaaagctgagggcgggaaac
aaggaggcgacggacgaggaactggagaagatgttagataagatcatgatcatcttccga
ttcatttacggcaaagatgtttttgaggccttctacaagaaagatctggctaagaggttg
ctggtgggaaagagtgcatccgtggatgctgagaagtccatgctgtccaaactgaaacat
gaatgtggagcggcattcaccagcaagctggaaggcatgttcaaggacatggagctttcc
aaggacattatggtgcagtttaaacagtacatccagtgtcaaaacatccctggtaacatt
gagctgacggtgaatatcctaaccatgggatactggcctacgtacatcccaatggaggtc
catctacctgcagagatggtgcggctgcaggagattttcaagacgttttacttgggcaag
cacagcggcaggaagctacagtggcagtcgacattaggccattgtgttttaaaagcggaa
tttaaggagggaaagaaagagcttcaggtttccctttttcagacattagtgttgctcatg
ttcaacgaaggagaggagttcaccttggaggagatcaagttagctacaggaatagaggat
ggcgagctgcgtcggacccttcagtcgttggcatgtggcaaggcgcgggtcatccacaaa
gtccccaaaagcaaagacgtggaggacggagacaagttctcctgcaacgatgacttcaaa
cacaaactcttcaggattaagatcaaccagatccagatgaaagaaacagtggaagagcaa
gccagcaccacggaacgagtctaccaggacaggcagtatcagattgacgctgccatcgtc
cggatcatgaagatgagaaagactctcagccataacctcttggtgtctgaagtctacaac
caactcaagttccctgtcaagccagctgacctgaagaagagaatagagtctctaattgac
agagattacatggagcgtgacaaggagaatccaaaccaatacaattatgtggcttga

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