KEGG   Esox lucius (northern pike): 105028082
Entry
105028082         CDS       T04894                                 
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
  KO
K11864  BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
els  Esox lucius (northern pike)
Pathway
els03440  Homologous recombination
els04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    105028082 (brcc3)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    105028082 (brcc3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:els01002]
    105028082 (brcc3)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:els04121]
    105028082 (brcc3)
   03036 Chromosome and associated proteins [BR:els03036]
    105028082 (brcc3)
   03400 DNA repair and recombination proteins [BR:els03400]
    105028082 (brcc3)
Peptidases and inhibitors [BR:els01002]
 Metallo peptidases
  Family M67
   105028082 (brcc3)
Ubiquitin system [BR:els04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    105028082 (brcc3)
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    105028082 (brcc3)
   BRISC complex
    105028082 (brcc3)
Chromosome and associated proteins [BR:els03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     105028082 (brcc3)
DNA repair and recombination proteins [BR:els03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     105028082 (brcc3)
SSDB
Motif
Pfam: BRCC36_C JAB Prok-JAB UPF0172
Other DBs
NCBI-GeneID: 105028082
NCBI-ProteinID: XP_010898853
Position
LG07:complement(37357387..37364527)
AA seq 260 aa
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVEL
PRILCQEEQDTYRKIHSLTHLDPITKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNK
QSIIELQLEKERLTQELATM
NT seq 783 nt   +upstreamnt  +downstreamnt
atggcagtgagtgcagttcacctagaatcggatgcctttttggtttgcatgaatcatgca
ttaagtaccgaaaaggaggaagttatgggactttgcatcggggaggttgacaccaaccgc
atcgtccatatacattctgttattatactccgacggtcagacaagaggaaggatcgcgtt
gaaatctctcctgagcagctatcttcagcggctaccgaagctgagcggttggcagaaatg
actgggcggccaatgcgcgtagttggttggtaccactctcacccccatatcaccgtttgg
ccatcacatgtggatgtaaggacccaggccatgtaccaaatgatggaccagggctttgtt
gggctaatattctcctgctttattgaggataaaaacacaaaaactggtcgtgttctctac
acctgcttccagtctgtgcaagcccagaaaggctctgagtatgagagaattgagattccg
attcatgtggttccacacgaggccattgggaaagtgtgccttgagtcagcagtggaactc
cccagaatcctttgccaggaagagcaggacacttacagaaagattcacagcttaacacac
ctggatccgataacaaagatacacaatggctcagtgttcacaaagaacctttgcagtcag
atgtctgctgttagtggtcccctgctgcagtggctggaggaccgcctggagcagaacaaa
cagagtatcattgagctgcagctggagaaagagaggctgacacaggagctggcaaccatg
tga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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