KEGG   Escherichia coli W: ECW_m0904
Entry
ECW_m0904         CDS       T02002                                 
Symbol
ybjK
Name
(GenBank) predicted DNA-binding transcriptional regulator
  KO
K23778  TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
elw  Escherichia coli W
Brite
KEGG Orthology (KO) [BR:elw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:elw03000]
    ECW_m0904 (ybjK)
Transcription factors [BR:elw03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    ECW_m0904 (ybjK)
SSDB
Motif
Pfam: TetR_C_31 TetR_N TetR_C_6 TetR_C_28 TetR_C_11
Other DBs
NCBI-ProteinID: ADT74411
UniProt: E0J5U4
Position
958819..959355
AA seq 178 aa
MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDELLLEAF
SSFTEIMSRQYQAFFSDVSDAQGACQAITDMIYSSQVATPDNMELMYQLYALASRKPLLK
TVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERVAG
NT seq 537 nt   +upstreamnt  +downstreamnt
atgcgtcgcgctaacgatccgcaacggcgagaaaaaattatccaggccacgctggaggcg
gtgaaactttacggaatacatgctgttacgcaccgcaaaattgctacccttgccggggtg
ccgttgggatcgatgacctactatttttcaggaattgatgagttgttgctggaggcgttc
agcagttttactgagatcatgtcccggcaatatcaggcattttttagcgatgttagtgat
gctcaaggcgcatgccaggctatcaccgatatgatctacagctcacaggttgcaacgccg
gataacatggagctgatgtaccagctctacgcgctggctagccgaaaaccgctattaaaa
acggtaatgcaaaactggatgcagcgcagtcagcaaacgctcgaacaatggtttgaaccc
ggaaccgcccgcgcgcttgatgcgtttattgaggggatgacgctgcattttgtcaccgac
cgtaagccgctatcgcgcgaggagattttgaggatggttgagagggttgcagggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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