KEGG T06039: FCS00

Elizabethkingia sp. 2-6: FCS00_04265

Entry

FCS00_04265       CDS       T06039

Name

(GenBank) HD domain-containing protein

K00970

poly(A) polymerase [EC:2.7.7.19]

Organism

elz Elizabethkingia sp. 2-6

Pathway

elz03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:elz00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FCS00_04265
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:elz03019]
    FCS00_04265
Enzymes [BR:elz01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     FCS00_04265
Messenger RNA biogenesis [BR:elz03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     FCS00_04265

SSDB

Motif

Pfam:

PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 MIOX

Other DBs

NCBI-ProteinID:

QCO45622

UniProt:

A0A4P8E549

Position

923095..924519

AA seq 474 aa
MKINLNQNKHLKIFKLVSEAAEQNTQSAYIVGGYVRDLLMQHKEPTDIDFVTESSGIKLA
ETVAENINPKPKVSVFKTYGTAMIKYQNLDLEFVGARKESYTENSRNPEVEIGTLEDDQK
RRDFTINAMAISLGKENFGELIDPFNGMQDLSDKILRTPLEPVQTYSDDPLRMMRAIRFA
STLNFRIEDNSLKAIKKEAKRIEIVSMERIMTEFNKIMLSEKPSTGLSILEKTGLFDIIL
PEITALKGIEEKEGQTHKDNFYHTLEVVDNISVNTDNLWLRWAALLHDVGKAPTKKFTPE
QGWSFHGHEFLGSKMVKTLFQRLKLPLGAEMKYVQKMVKLSSRPIALITDDTSDSALRRL
LFDAGKDLEDLFTLCKADITTKNSSKQKRFKKNFEYVEQKIKEVEEKDHVRNFQPPISGE
EIMEMFSLKPGKEIGILKEKVKEAILEGEIPNEKEAARNFVIEQASLIGVEIKK

NT seq 1425 nt +upstreamnt +downstreamnt
ttgaagatcaatcttaaccaaaataaacacttaaaaatattcaaactggtctctgaggcc
gcagaacaaaatacacaatctgcttatatagtaggcggatatgttcgtgatttgcttatg
cagcataaggagccaacagatatagattttgtaacggaaagcagcggaattaagcttgcg
gaaaccgtagcagaaaatatcaatccaaaacctaaggtttcggttttcaaaacttatggt
actgctatgattaaataccagaatcttgatctggaatttgttggggcacgtaaagaaagt
tatactgaaaacagccgtaatccggaggtagaaatcggtacattggaagacgaccaaaaa
cgtcgggattttactattaatgcaatggcaatatctctgggaaaggaaaatttcggagaa
ctgattgatccattcaacgggatgcaggatttaagtgataaaatcctccgtactccattg
gaacccgtacaaacctattctgatgaccctttacgtatgatgcgcgctataagatttgca
tctactcttaatttcagaattgaagacaattcattaaaggctattaaaaaggaagctaag
cgtatagaaattgtatctatggaacgcattatgacggagttcaataaaataatgttatct
gaaaagccatctacagggttaagtattctggagaaaacaggactttttgatattattctt
cctgaaattacggctcttaaaggaattgaagaaaaagaagggcaaacccataaagacaat
ttctatcatacattggaagttgtagacaatatttcagtaaacactgataatctatggctg
cgttgggctgcattgcttcacgatgtaggaaaagcacctaccaagaaattcacacctgaa
cagggatggtctttccacggtcatgagtttctgggttctaaaatggtaaaaacactattc
caaagactgaaacttcctttaggtgctgaaatgaagtatgtgcaaaaaatggtaaagcta
tcttcccgccctatagcccttattacggatgatacatcggatagtgcattaagaagactt
ctttttgatgcaggaaaagatcttgaagatcttttcaccttatgtaaagctgatattaca
actaaaaattcgagcaaacagaaacgtttcaagaaaaattttgagtatgtagaacaaaaa
ataaaggaagtagaagagaaagatcatgtacgtaatttccagcctcctatctccggagaa
gaaattatggaaatgttttctttaaaacctggtaaggaaattggcattctgaaagaaaaa
gtaaaagaagctattctggagggcgaaattccgaacgaaaaagaagctgccagaaatttt
gttatagagcaagcctcattgattggtgttgaaataaaaaaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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