KEGG   Elizabethkingia sp. 2-6: FCS00_14360
Entry
FCS00_14360       CDS       T06039                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
elz  Elizabethkingia sp. 2-6
Pathway
elz02020  Two-component system
elz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:elz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FCS00_14360 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FCS00_14360 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:elz03021]
    FCS00_14360 (rpoN)
Transcription machinery [BR:elz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FCS00_14360 (rpoN)
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID Med9 Carn_acyltransf
Other DBs
NCBI-ProteinID: QCO47495
UniProt: A0A4P8E8U7
Position
3098663..3100126
AA seq 487 aa
MLKQNLQIKLGQKMAPQQIQLMKLIQLHTLEFEEELQRELEENPALEKAVDEAKEDDYSD
IDSSYDDEGTESIETDFDVNEYLFDDEPSYKTAASNYSPDDEEFDNQSLLTEGQSLYDYL
IEQIRLTKIGEEDLKIAEYIIGNLDNDGYLRRDIKSLVNDMAFSLGVYTTPENVEDVLTN
YVQKLDPPGVAARDLKECLLLQIEKKVSGNPAVSLAHNILLHQFDALSNKHYNKIMHKYD
VEEDDLKDALDEISKLSPKVGGNFDTQTITINQEIIPDFVINVKDGKVTAALNSKNAPQL
RVSDEYKEILTTYSHDKTSQEHKQAALFIKQKLDAAKWYIDAINQRQNTLMQTINAIIRL
QKDYFITGDDKSIKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKNLFSDSLTN
DDGEEVSTKEIKNHLQDIIDKENKRKPYTDDALVGMLKDKGYNIARRTIAKYREQLNIPV
ARLRKEL
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgctgaaacaaaatttacagataaaacttggccagaaaatggcaccgcaacaaattcag
ctgatgaagcttatccagctccatactcttgaatttgaagaagaattacaacgggagctg
gaagaaaatccggcgttggaaaaagctgtggacgaagccaaggaagatgattattcggat
attgatagtagttacgatgatgaaggaacagaatctatagaaactgatttcgatgtaaat
gaatacctgtttgatgacgaaccttcttataaaactgcagcgagtaactactcgccggat
gatgaagaattcgataatcagtcgttgcttacagaaggacagtccttgtacgattacctt
atagagcagatccgattgacgaagattggtgaggaggatctgaaaatagcagaatatatt
ataggtaacctggacaatgacggttatctgagaagagatataaagtctctggttaatgat
atggctttttcattgggagtatatacaacacctgaaaatgtagaagatgtattaaccaat
tatgtacaaaaactggatccaccaggagtagcagcaagagatttgaaagaatgccttctg
ctacagattgagaaaaaagtaagcggaaatccggcagtgtcattggctcataatatttta
cttcaccagtttgatgctttaagtaacaagcattataacaaaatcatgcataagtatgat
gtagaggaggatgatctgaaagatgcgttggatgaaatctctaagttatctcctaaagtt
gggggcaatttcgatacgcagaccattacaatcaatcaggaaatcattccggattttgtc
atcaatgtaaaagacggaaaagtcacagcagcactaaacagtaagaatgctccgcagctc
cgtgtttcagatgagtataaagagattttgacaacttactcgcatgataaaacatcccag
gagcataagcaggcagctctgtttatcaaacaaaagctggatgctgcaaaatggtatata
gatgctattaatcagcgtcagaatacattgatgcagaccattaatgctattataaggtta
cagaaagattactttattaccggagatgacaaaagtataaagcctatgattctgaaagat
gtagcagatattacaggttttgatatttctacaatttcccgtgtggtaaaaagtaaatat
gctgatacacctaatggtatcgtttatctgaagaatcttttctcggatagtcttacaaat
gatgacggtgaagaggtttcaaccaaagagattaagaatcacctgcaggatattatagac
aaagaaaataaaagaaaaccttataccgatgatgcattagtaggaatgctgaaagataaa
ggatataatattgcccgacgtactattgctaaatacagagagcagctgaatattccggta
gcaagattaagaaaagagttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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