KEGG   Escherichia marmotae: C1192_05625
Entry
C1192_05625       CDS       T05353                                 
Name
(GenBank) cyclic di-GMP phosphodiesterase
  KO
K14051  c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
Organism
ema  Escherichia marmotae
Pathway
ema02024  Quorum sensing
ema02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:ema00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C1192_05625
   02026 Biofilm formation - Escherichia coli
    C1192_05625
Enzymes [BR:ema01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     C1192_05625
SSDB
Motif
Pfam: EAL GGDEF PAS_9 PAS PAS_8 GGDEF_2 PAS_10 PAS_4
Other DBs
NCBI-ProteinID: AUT26650
Position
1053735..1055720
AA seq 661 aa
MKTIRESTTLYNFLGSHNPYWRLSENSDVLRFSATETTEPERTLQLSAEQAARIREMTVI
TSSLMMSLTVDESDLSVHLVGRKINKREWGGNASAWHDTPAVARDLSHGLSFAEQVVSEA
HSAIVILDSRGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASMRNNRGFFRNG
NAYEVEIWIPTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERHAQERLRILANTD
SITGLPNRNAMQELIDHAINQVDESKVGVVYLDLDNFKKVNDAYGHLFGDQLLREVSLAI
LSCLEPDQVLARSGGDEFLVLAPNTSQSALEAMASRILTRLRQPFRIGLIEVYTGCSIGI
SLSPQHGPDSAAIIRHADTAMYSAKEGGRGQFCVFSPEMNQRVFEYLWLDTNLRKALEND
QLVIHYQPKITWRGEVRSLEALVRWQSPEHGLIPPLDFISYAEESGLIVPLGRWVILDVV
RQVAKWRDKGINLRVAVNVSARQLADQTIFTDLKQVLQELKFEYCPIDVELTESCLIEND
ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQTVSQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR
A
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgaaaaccattagggagtccacaacgttgtacaactttctcggatcgcacaacccatac
tggcggttgtcggaaaacagtgatgttttgcgtttttccgccaccgaaacaacggaacct
gaacgtactctgcagttatctgccgaacaggctgctcgtatccgggaaatgacggttatc
acctccagcctgatgatgagcctgacagtcgatgagagtgatctttctgttcatctggtg
ggacgaaaaatcaataagcgtgaatggggtggaaacgcgtcagcatggcatgacacaccg
gcggtagctcgtgatttatcacacggactgtcctttgcagaacaagtggtttctgaagcc
cactctgcaatagtgattctggacagtcggggaaatatccagcgttttaaccggttatgt
gaagagtacacggggctgaaagaacacgatgtcatcgggcaaagtgtgtttaaactgttt
atgagtcgtcgtgaagctgcggcatccatgcgcaataaccgtggattttttcgaaacggc
aatgcatatgaggtagaaatctggatacccacgcgtaaaggccagcggctgtttctgttt
cgcaacaaattcgtgcatagcggcagcggcaaaaatgagatctatttaatctgctccggc
accgatatcaccgaagaacgccacgcccaggagcgcttgcgaattctggctaacaccgac
agcattacagggctgccgaatcgtaacgctatgcaggaattaatcgatcacgccattaat
caggtggatgaaagtaaagtcggcgtggtttatctcgatttagacaattttaaaaaagtg
aacgatgcctacgggcatttgtttggcgaccagttgttacgcgaggtttcactggccatt
ttaagctgtcttgagccggatcaggtactggcgcgctctggcggcgatgaatttctggta
ctcgcaccaaacacctcacaaagtgccctggaagcaatggcatcgcggattttgacccgc
ctgcgtcagccttttcgcattggtttaatcgaagtttatactggctgttcgatcggtatt
tcactttcaccgcaacatggcccagacagtgcggcaattattcgccacgccgatacggca
atgtacagtgccaaagaaggcggtcgagggcaattttgcgttttttcaccggaaatgaat
caacgggtatttgaatatctgtggttggataccaacctgcgtaaagcactggaaaacgat
cagttagttattcactatcaaccgaaaatcacctggcgcggtgaagtgcgcagtctggaa
gctctggtgcgctggcagtcgcccgaacacggactaattcccccactggactttatttcc
tatgcggaagagtccggtctgattgtgcctctgggtcgttgggttattcttgacgtcgtt
cgccaggtggcaaaatggcgagataaaggcatcaatcttcgggtggcagtcaatgtctca
gcacgccaactcgctgatcaaactattttcactgacctgaaacaggtactccaggaactt
aaatttgagtattgccctattgatgtcgagctgactgaaagctgcctgattgaaaacgac
gagctggcgctttccgttattcagcaattcagtcaattaggcgcacaggttcacctggat
gatttcggcactggctactcttccctttctcaactggcacgatttcctatcgatgccatt
aaactcgaccaggtttttgtccgtgatattcacaaacaaactgtctcacagtcgctggta
cgggcaattgtcgccgtagctcaggccttgaacctgcaggttattgccgaaggcgtagaa
agcgcaaaagaagatgcttttttaaccaaaaacggcatcaatgagagacaaggattcttg
tttgccaaaccgatgcccgccgtagcgtttgaacgctggtataaacgttatctgaaacgc
gcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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